Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g67 ATGAGAAGCTCTTGGATCAATAAATTATCTGTCATTCTTGGTCCTAGACCGCCGGTCAGCTGGTTACTATTGTGCCTCATTAGCGTCCTTGCACTAATAGCAGTCTTAGGTTCATCTTCTTCAAATAGCTTTGAGTCTGTGACATCCATTCCGGTACCTGACATCTATACAAACTATAGACGGCTAAAGGAGCAAGCGGCAATTGATTATTTGGAGTTGAGGACTCTGTCTTTGGGAGTCAGTCGGCAAAGGGAGCTTGGTCTTTGTGGCAAAGAACTAGAAAATTATGTACCATGCTACAATGTTTCTGCAAATTTGTTAGCTGGGTTTAAGGATGGAGAGGAGTTTGATCGCCACTGTGAACTGTCACGAGATGGACAGCGGTGTTTGGTTCGTCCGCCCAAGGACTATAAGATCCCTTTGAGGTGGCCAGCTGGTAGAGATGTAATATGGAGTGGGAATGTAAAAATAACCAAAGATCAGTTTCTTTCTTCTGGAAGCATGACGAAAAGGTTGATGTTGCTTGAAGAGAATCAAATTGCTTTCCACTCTGAGGATGGATTGAACTTTGATGGCGTCAAAGAATATTCTCGCCAAATTGCGGAAATGATAGGGTTGGGAAGTGACTCTGAATTTCTTCAAGCTGGTGTACGGACTGTACTAGATATTGGCTGCGGGTTTGGCAGCTTTGCTGCTCATTTAGTCTCGCTAAAGTTAATGGCTGTTTGTATTGCGGAGTATGAGGCAACTGGCAGCCAAGTTCAATTGGCCCTTGAGAGAGGCCTTCCAGCAATGATTGGCAATTTCATTTCGAGACAACTTCCTTATCCATCATTGTCTTTTGACATGGTTCATTGTGCTCAGTGTGGTATCATTTGGGACAAGAGAGATGGGATGTTCCTCATAGAAGTGGACCGGGTGCTCAAGCCTGGCGGTTACTTTGTTCTAACCTCGCCCACAAGCAAGCCACGTGGAAGTTCATCAAGTACAAAGAAGGGAAGTGTGTTAACACCTATTGAAGAACTCACCCAAAGAATCTGTTGGAGTCTTCTAGCTCAGCAAGATGAGACTTTAATTTGGCAGAAAACTATGGATGTTCATTGCTATACATCTCGCAAGCAGGGTGCTGTACCACTTTGTAAAGAAGAGCATGACACTCAATCATATTATCAGCCCCTCATACCATGTATCAGTGGGACCACCAGCAAACGCTGGATTCCTATTCAGAACAGGTCCTCTGGTTTCCATTTGAGCTCAGTTGAGCTTGAAGTCCATGGAAATTCATCCTGA 1290 44.19 MRSSWINKLSVILGPRPPVSWLLLCLISVLALIAVLGSSSSNSFESVTSIPVPDIYTNYRRLKEQAAIDYLELRTLSLGVSRQRELGLCGKELENYVPCYNVSANLLAGFKDGEEFDRHCELSRDGQRCLVRPPKDYKIPLRWPAGRDVIWSGNVKITKDQFLSSGSMTKRLMLLEENQIAFHSEDGLNFDGVKEYSRQIAEMIGLGSDSEFLQAGVRTVLDIGCGFGSFAAHLVSLKLMAVCIAEYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKRDGMFLIEVDRVLKPGGYFVLTSPTSKPRGSSSSTKKGSVLTPIEELTQRICWSLLAQQDETLIWQKTMDVHCYTSRKQGAVPLCKEEHDTQSYYQPLIPCISGTTSKRWIPIQNRSSGFHLSSVELEVHGNSS* 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 701418 707690 - Vvi1g67 Vvi1g67 769267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g67 429 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 322 IPR029063 -
Vvi1g67 429 CDD AdoMet_MTases 219 317 - -
Vvi1g67 429 Gene3D Vaccinia Virus protein VP39 193 369 IPR029063 -
Vvi1g67 429 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 95 403 IPR004159 GO:0008168
Vvi1g67 429 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 1 425 IPR004159 GO:0008168
Vvi1g67 429 PANTHER METHYLTRANSFERASE PMT4-RELATED 1 425 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g67 K23870 - vvi:100245694 831.632