Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g70 ATGCCGATGGGGGTGAAGGGAACAATGGTGGGTGTTCTTCTATTTTGTGCCTGGTTTTTTGAGGGATTTGCAGAAGATGTGAAAGTAACGGTTGGAGGAGTGACTTCGATAGCTGAAACAGATGATAATTTCATCTGTGCCACCATTGATTGGTGGCCTGCTGATAAGTGTGATTACAATCAATGTCCATGGGGATTAGCTGGCATCTTCAATCTGGATTTGCAGAACATCATTCTTGTGAATGCTATCAAAGCATTTGATAATCTGAGAATCAGAATGGGAGGCTCACTACAAGATCAGATACTCTACCAAATTGGATATGCCATTCATGACTGCCCACAAATAAAAAAGGTTGAGGGTGGTCTGTTTGGATTCTCAGAAGGTTGTCTCACCATGCAGAAATGGGATGAAGTCAATAAACTCATCAACCAAACTGGAGCTTTGTTTACTTTTGGATTGAATGCCCTGATCGGGAAGAACAAGCCGGAGCCGCCTCCCAAAGGTGACAATATCACTTGGACTGGTGATTGGGACTCGCAAAATGCCCGCGACCTGATCGAGTACACTCTGTCAAAAGGGTACAAGATCGATTCATACGAACTAGGAAACGAGCTGTGTGGATCTGGGGTTTCCGCAAGGCTTGATGCTAAGCAGTATGCAAAGGACCTGGTGAAACTAAGACAAACGGTGAAAGACGTTTACCAAAAGGCAAGGCCAATGCCCAAGATCATGGGGCCAGCTGGCTTTTATGATAAGGAGTGGTTCGACACCTTCCTGGAGGCTGCAGGGCCACATGCTGTCGATGGATTGAGTCACCATACTTACAACCTTGGCCCAGGGGTTGATCCCACCCTCATCAACAAGGTTCAGGACCCGTACTTCCTCTCCCAAATAGCTCAGACGTATAAGGATATCTCGGACAGCATCAGGCTGTTTGGGCCATGGGCATCTGCATGGATTGGAGAAGCTGGTGGGGCTTACAACAGCGGTGGCAAAGATGTCTCCCACACCTTTGCCAATGGCTTCTGGTACTTGGATCAACTGGGCATGTCAGCAAGCTTCAACCACAAGGTCTTCTGCAGACAATCTTTAATTGGAGGAAATTATGGCCTCCTTGATACTACAAGTTTCATCCCTAATCCTGATTATTACGGTGCTCTTTTGTGGCATCGTCTAATGGGCAAGAGAGTTCTTTCCACCTCTCAAAATGACTCTCCTTACTTGCGCGTATATTCCCATTGTGCGAAGCAAAAGCCGGGCATTAGCATGCTTATAATCAACATGTCAAACTCGACTTGGTTCCAAGTCCAAGTCCAGAATGACATGAATCTGCACCCAACTGCTTCTGAAAGTAATGGAGGACAAGAAAGGGAGGAGTACCATTTGACTCCTCAGAATGGGGATATCCAAAGTGATAAGTTGTTACTCAATGGAAATCTATTATCACTTACAGAAGCATCAGACATCCCAGAAATGAAGCCCAAGCTTGTTGATCCTTCTAGTGCCATTGTAGTTGCCCCTGACTCATTTGTCTATGCAACTCTCAGGGACTTCAAGGCTCCTACATGCATGTAA 1575 45.9 MPMGVKGTMVGVLLFCAWFFEGFAEDVKVTVGGVTSIAETDDNFICATIDWWPADKCDYNQCPWGLAGIFNLDLQNIILVNAIKAFDNLRIRMGGSLQDQILYQIGYAIHDCPQIKKVEGGLFGFSEGCLTMQKWDEVNKLINQTGALFTFGLNALIGKNKPEPPPKGDNITWTGDWDSQNARDLIEYTLSKGYKIDSYELGNELCGSGVSARLDAKQYAKDLVKLRQTVKDVYQKARPMPKIMGPAGFYDKEWFDTFLEAAGPHAVDGLSHHTYNLGPGVDPTLINKVQDPYFLSQIAQTYKDISDSIRLFGPWASAWIGEAGGAYNSGGKDVSHTFANGFWYLDQLGMSASFNHKVFCRQSLIGGNYGLLDTTSFIPNPDYYGALLWHRLMGKRVLSTSQNDSPYLRVYSHCAKQKPGISMLIINMSNSTWFQVQVQNDMNLHPTASESNGGQEREEYHLTPQNGDIQSDKLLLNGNLLSLTEASDIPEMKPKLVDPSSAIVVAPDSFVYATLRDFKAPTCM* 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 721720 725418 + Vvi1g70 Vvi1g70 769270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g70 524 PANTHER OS07G0598400 PROTEIN 21 524 - -
Vvi1g70 524 Gene3D Glycosidases 66 391 - -
Vvi1g70 524 SUPERFAMILY (Trans)glycosidases 40 393 IPR017853 -
Vvi1g70 524 Pfam Glycosyl hydrolase family 79, N-terminal domain 27 349 IPR005199 GO:0016020|GO:0016798
Vvi1g70 524 PANTHER HEPARANASE-RELATED 21 524 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g70 Vvi17g619 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g70 K07964 - vvi:100254131 1085.09