Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g702 ATGGAATATTTATCAAACAAGAAATTTCCCATCAATTCAAAAGATTACAAGTTATATGAGGAAGTTGGTGAAGGTGTTAGTGCCACAGTGTACAGAGCTCTCTGCATTCCATTTAATGAGATAGTCGCTGTCAAGGTTATGGATCTGGAGAGGTGCAACGATAACTTGGATGGTATTCGACATGAAGTACAAACTATGAGCCTGATTGATCATCCAAATGTACTCAGGGCACATTGCTCTTTCTCAGTGGGAAGCTGCCTCTGGATTGTGATGCCTTATATGGCTAGTGGATCTTGTCTTCACATAATGAAATCTTCTTATCCAGAGGGTTTTGAACAGGCTGTTATTGCAACACTATTACGTGAAGTTCTTAAAGCTCTTGTTTATCTTCATTCCAATGGACACATCCACAGAGATGTTAAGGCTGGGAATATCTTGGTTGATTCCAAAGGTGCAATTAAGTTGGCTGACTTTGGAGTTTCGGCATGTATGTTTGATGCTGGAGATAGACAACGTTCAAGGAACACATTTGTGGGAACTCCATGCTGGATGGCTCCTGAAGTTATGCAGCAATTAAATGGATATGACTTTAAAGCAGACATCTGGTCTTTTGGAATAACCGCTCTGGAACTTGCTCATGGTCATGCCCCATTTTCCAAGTATCCACCAATGAAGGTGTTGCTGATGACATTACAAAATGCACCACCTGGTCTTGACTATGAAAGGGATCGAAGATTTTCAAAGTCGTTTAAAGAGATGGTAGGTGCTTGCTTAGTGAAGGATCCAAAGAAGCGTCCCACATCAGAGAAGCTTTTAAAGCACCGTTTCTTTAAACATGCATGCTCAAAAGAGTTTTTGGCCTGGGCTATTCTTAATGGCCTTGCTCCACTCGGTGACCGGTTTAGGATGCTGAAGGCTGACTTTCTTGTACAAAAGAGGGGTATGGATGGGAATAAAGAGCAACTATCACAAGTAACTATAAGTAAATTTGTGCTGAAATGGAAATTTTCAATTGGAAGAAAAGGAAAGCAAAATTCTCTAAAATATGAAAATTTCAAGAAAGAACCCAAGGACCCAAAACATGATTCTGTTCATAATACCAAATGA 1107 40.02 MEYLSNKKFPINSKDYKLYEEVGEGVSATVYRALCIPFNEIVAVKVMDLERCNDNLDGIRHEVQTMSLIDHPNVLRAHCSFSVGSCLWIVMPYMASGSCLHIMKSSYPEGFEQAVIATLLREVLKALVYLHSNGHIHRDVKAGNILVDSKGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLNGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRRFSKSFKEMVGACLVKDPKKRPTSEKLLKHRFFKHACSKEFLAWAILNGLAPLGDRFRMLKADFLVQKRGMDGNKEQLSQVTISKFVLKWKFSIGRKGKQNSLKYENFKKEPKDPKHDSVHNTK* 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8012585 8021182 - Vvi1g702 Vvi1g702 769902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g702 368 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Vvi1g702 368 Gene3D Transferase(Phosphotransferase) domain 1 97 289 - -
Vvi1g702 368 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 347 - -
Vvi1g702 368 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Vvi1g702 368 MobiDBLite consensus disorder prediction 347 368 - -
Vvi1g702 368 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 347 - -
Vvi1g702 368 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi1g702 368 CDD STKc_OSR1_SPAK 14 277 - -
Vvi1g702 368 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi1g702 368 SUPERFAMILY Protein kinase-like (PK-like) 14 287 IPR011009 -
Vvi1g702 368 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g702 Vvi14g1350 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76518 PF00069 Pkinase 1.30E-58 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g702 K08835 - vvi:100853867 628.632