Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g719 ATGCGCCTCCTGGTCCACCTCCATTGCGTTCAATATGTCAACACAAGGCTCCTGTATTTGGAAAGCCCCCCAAGGTGGTTCAGCTATGTTGAGCTGGAGCTTGCTACTGGTGGATTTTTACAAGCTAATTTCTTGGCAGAAGGCGGGTTTGGATCTGTCCACAGAGGGGTCCTACCTGATGGCCAAGCAGTTGCTGTGAAGCAATACAAATTGGGTAGTTCTCCGGGTGATGTTGAATTTTGCTCAGAAGTGGAAGTCCTGAGCTGTGCTCAGCACCGAAAAGTTGTTATGCTGATTGGGTACTGTATAGAAGACAGAAGAAGGTTGCTAGTTTATGAATATAGATGCAATAGCTCACTGGATTCTCATCTATATGGACGCCATCGAGATCCACTAGAATGGTCTACTGGAGAAAAAGTTGCTGTTGGAGCTGCTCGAGGTCTGCGTTACCTTCATGAAGAATGCAGAGTGGGTTGCATTGTCCACCGTGACATGCGACCCAACAACATCCTCATCACCCATGATTTTGAGCAACTGGTTGGGGATTTTGGCTTAGCTAGGTGGCAGCCTGATGGAGACACGGGTGTGGAAACAAGAGTAATTGGAACATTTGGGTATTTGGCTCCAGAATATGCTCAAAGTGGCCAAATCACAGAAAACGCTGATGTATATTCTTTTGGGGTTGTCTTGGTGGAGCTTGTCATAGCATGGACGAAAAGCTGTGGACCTTAA 732 46.86 MRLLVHLHCVQYVNTRLLYLESPPRWFSYVELELATGGFLQANFLAEGGFGSVHRGVLPDGQAVAVKQYKLGSSPGDVEFCSEVEVLSCAQHRKVVMLIGYCIEDRRRLLVYEYRCNSSLDSHLYGRHRDPLEWSTGEKVAVGAARGLRYLHEECRVGCIVHRDMRPNNILITHDFEQLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITENADVYSFGVVLVELVIAWTKSCGP* 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8296331 8298549 + Vvi1g719 Vvi1g719 769919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g719 243 SUPERFAMILY Protein kinase-like (PK-like) 13 235 IPR011009 -
Vvi1g719 243 PANTHER OS01G0253100 PROTEIN 21 236 IPR045271 GO:0004714|GO:0006468
Vvi1g719 243 Gene3D Transferase(Phosphotransferase) domain 1 116 240 - -
Vvi1g719 243 Pfam Protein tyrosine and serine/threonine kinase 44 234 IPR001245 GO:0004672|GO:0006468
Vvi1g719 243 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 21 236 - -
Vvi1g719 243 ProSiteProfiles Protein kinase domain profile. 39 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi1g719 243 Gene3D Phosphorylase Kinase; domain 1 6 114 - -
Vvi1g719 243 ProSitePatterns Tyrosine protein kinases specific active-site signature. 160 172 IPR008266 GO:0004672|GO:0006468
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76519 PF07714 PK_Tyr_Ser-Thr 1.30E-36 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g719 - - vvi:100243170 448.743