Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g72 ATGATGATGGTGAAGCAACACGGTCACGACACTGTGAAGGAGGCTTCCCCACCTCATATATCTACTGGGGAAGGTGGAGTCAAAGCCTCATCCCCATTATTTGATCCATCTCTCTGCAAAACATCTTCAGAGTTTCTTTCTTTCCAAACATCCATGGATCCAACTTCTCACCACAGGCCCGGCTCTCACCCCCAGAAGCACCACCAACCATCCAGCAGTGAGCTCCTCTCAAGTGCCAAGGTAGTTGCAGAGGCAGCCCAATACCAGTCCTCCCACTCCACCACCACAACCATCAATTCTGGCCACTCAACCACCAACACCACAGAGACACATTCCTCCTCACACTCCGGTGGTGGTGACAGCCATTCTGGAGGTGGGTATGGTGACTACTTGAAGATGGCTGAAGGTTTCTTGAAAAAGTACTGA 426 50.94 MMMVKQHGHDTVKEASPPHISTGEGGVKASSPLFDPSLCKTSSEFLSFQTSMDPTSHHRPGSHPQKHHQPSSSELLSSAKVVAEAAQYQSSHSTTTTINSGHSTTNTTETHSSSHSGGGDSHSGGGYGDYLKMAEGFLKKY* 142
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 729266 731550 - Vvi1g72 Vvi1g72 769272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g72 141 MobiDBLite consensus disorder prediction 35 58 - -
Vvi1g72 141 PANTHER EXPRESSED PROTEIN 49 94 IPR040294 GO:0009408|GO:0010115
Vvi1g72 141 PANTHER EXPRESSED PROTEIN 105 140 IPR040294 GO:0009408|GO:0010115
Vvi1g72 141 MobiDBLite consensus disorder prediction 1 129 - -
Vvi1g72 141 MobiDBLite consensus disorder prediction 66 120 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g72 - - vvi:100262861 94.7449