Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g736 ATGGACGTGGACAAGGTTGCTTTCACTGGATCAACTAAGACCGGAGAAGCTATACTTCAATCGGCTGCAATGAGCAATCTTAAGCCAGTGACTTTAGAGCTTGGAGGCAAATCCCCTTTCATTGTGTGTGAGGATGCTAATGTGGATGAGGCTGTTGAGATGGCCCACTTTGCTTTATTCTTTAATCAGGGGCAATGCTGTGCTTCTGGCTCTCGCACATTTGTACATGAAAGTGTATATGACGAGTTTGTAGAGAAGGCAAAAGCACGTGCTTTAAGACGTACTGTTGGTGATCCATTCAAGGCAGGTATTGAGCAAGGACCCCAGATTGATTCAAAGCAGTTTGAGAAGATCATGAGATACATAAGGTCCGGTGTTGAAAGTGGAGCTACCCTTGAGAGTGGAGGTGAGAGATTTGGCAAGGAGAGATCTCGGGTAATGTGGCGTTTTGCCGATTTGCTTGAAGATCACAACGATCAAATTGCAGCACTTGAGACTTGGGATAATGGGAAGCCATATGAACAGGCTGCCAAAGTTGAATTTCTTGAAACTTGGAAAAGTTTTCTGTATACAAATTCCTCAGGTTGGGCAGATAAAATTCATGGTCTCACAATTCCTGCTGACGGACTGCACCATGTACAAACATTGCATGAGCCAATTGGTGTAGCGGGGCAGATCATTCCCTGGAATTTCCCACTTCTCATGTACGCTTGGAAGGTCGGGCCTGCATTAGCATGTGGGAACACTGTTATTCTAAAGACTGCAGAACAGACACCATTGTCTGCGCTCCATGATGTTCAGGTCAGGCATGACTCTTTCTTCTCAAGTCCTATTGAATTTGCTGGACTTCCACCAGGTGTTCTAAATGTGGTTTCTGGTTATGGTCCAACTGCTGGTGCTGCCCTTGCCAGTCATATGGATGTCAATAAGCTTGCTTTCACTGGATCAACTGAAACTGGGAAAATTGTAATTCAGTTGGCTGAAAAAAGCAATCTTAAGCCAGTGACTCTAGAGCTTGGGGGCAAATCCCCTTTCATTGTGTGTGAGGATGCTAATGTAGATGAGGCTGTGGAGCTGGCACATTTTTCTCTGTTCTTTAATCAAGGGCAATGCTGTTGTGCAGGTTCTCATACTTATGTACATGAACGTATATATGATGAATTTGTAGAGAAGGCTAAAGCACGAGCTTTGAAACGCGTTGTTGGTGATCCATTCAAGGCAGGCACTGAGCAAGGCCCACAGATTGATTCAGAGAAATTTGAGAAGATCCTGAGATACATAAGATCTGGTGTTGATAATGGAGCTACACTTGAAACTGGAGGTGAGAGATTTGGCACTGGGGGCTACTTTATTAAGCCCACTGTTTTCTCCAATGTTCAGGATGACATGTTGAAAGCACAGGATGAGATCTTTGGACCAGTGCAGTCCATCCTGAAGTTCAAGGACCTTGATGAGGTGATAAGAAGGGCAAATGCCTCTAACTGTGGACTGGCTGCAGGAGTCTTTACCCAGAACATAGACACTGCCAACACCTTGACACGGGCATTAAGAGTTGGGACGGTGTGGATTAATTGCTTTGATGTCTTTGATGCTGCTATTCCTTTTGGTGGATATAAGATGAGCGGGAATGGCAGGGAGAAGGGAATTTATTGTCTTCAAAACTACTTGCAAGTGAAGGCTGTTGTTTCTCCCTTGAAGAACCCAGCATGGTTGTAA 1716 44.7 MDVDKVAFTGSTKTGEAILQSAAMSNLKPVTLELGGKSPFIVCEDANVDEAVEMAHFALFFNQGQCCASGSRTFVHESVYDEFVEKAKARALRRTVGDPFKAGIEQGPQIDSKQFEKIMRYIRSGVESGATLESGGERFGKERSRVMWRFADLLEDHNDQIAALETWDNGKPYEQAAKVEFLETWKSFLYTNSSGWADKIHGLTIPADGLHHVQTLHEPIGVAGQIIPWNFPLLMYAWKVGPALACGNTVILKTAEQTPLSALHDVQVRHDSFFSSPIEFAGLPPGVLNVVSGYGPTAGAALASHMDVNKLAFTGSTETGKIVIQLAEKSNLKPVTLELGGKSPFIVCEDANVDEAVELAHFSLFFNQGQCCCAGSHTYVHERIYDEFVEKAKARALKRVVGDPFKAGTEQGPQIDSEKFEKILRYIRSGVDNGATLETGGERFGTGGYFIKPTVFSNVQDDMLKAQDEIFGPVQSILKFKDLDEVIRRANASNCGLAAGVFTQNIDTANTLTRALRVGTVWINCFDVFDAAIPFGGYKMSGNGREKGIYCLQNYLQVKAVVSPLKNPAWL* 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8847245 8851245 - Vvi1g736 Vvi1g736 769936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g736 571 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 337 344 IPR029510 GO:0016491
Vvi1g736 571 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 141 561 IPR016162 GO:0016491
Vvi1g736 571 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 141 571 - -
Vvi1g736 571 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 141 - -
Vvi1g736 571 SUPERFAMILY ALDH-like 2 138 IPR016161 GO:0016491
Vvi1g736 571 SUPERFAMILY ALDH-like 141 564 IPR016161 GO:0016491
Vvi1g736 571 Pfam Aldehyde dehydrogenase family 141 561 IPR015590 GO:0016491
Vvi1g736 571 Pfam Aldehyde dehydrogenase family 2 138 IPR015590 GO:0016491
Vvi1g736 571 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 34 IPR016162 GO:0016491
Vvi1g736 571 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 32 39 IPR029510 GO:0016491
Vvi1g736 571 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 343 532 IPR016163 GO:0016620
Vvi1g736 571 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 1 141 - -
Vvi1g736 571 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 141 571 - -
Vvi1g736 571 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 365 376 IPR016160 GO:0016491
Vvi1g736 571 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 35 136 IPR016163 GO:0016620
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g736 Vvi17g722 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g736 K00128 - vvi:100267386 727.243