Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g738 ATGACTATTCCTAGGATCTCATCGCTGCTCTCTCGCTCTTTCACTTCTTCTGCTTCTTCTGCTTTGCTTTCTTCCATAGGGAGGAATTCATCCCGGAGGGGCGGGATCTTTAGATATAGCACTGCTGCAGTTGTTGAAGAACCAATCAATCCTTCTGTTAATGTCAATTATACTCAGCTTTTAATCAATGGACAATTTGTGGATGCCGCAACGGGGAAAACTTTTGAGACATTGGACCCCAGGACAGGGAATGTGATTGCCAGTGTTGCTGAAGGTGACGCAGAAGATGTTAATCGAGCTGTCTCGGCTGCTCGCAAGGCGTTTGATGAGGGACCATGGCCTAGGATGAGTCCTTATGAGAGATCCAAGATACTCTTGCGTTTTGCTGATTTGCTTGAAAAGCACAATGATGAGATTGCAGCACTCGAGACTTGGGATAATGGGAAACCATTTGAACAGGCTGCAAAGGCTGAAGTACCATTGGTGATACGTTTGATGCGGTACTATGCGGGTTGGGCAGATAAGATTCATGGTCTCACGGTTCCTGCTGATGGATTGCATCAAGTGCAAACCTTGCATGAACCCATTGGCGTTGCTGGACAGATTATCCCCTGGAATTTCCCACTTCTCATGTATGCTTGGAAGATTGGACCTGCATTAGCATGTGGTAACACTATCGTTCTAAAGACAGCAGAGCAGACACCATTGTCTGCTTTATATGCATCGAAGTTATTGCATGAGGCCGGGCTTCCTCCAGGTGTTCTAAATGTGGTTTCTGGTTATGGTCCAACTGCTGGTGCAGCACTTGCCAGCCATATGGATGTGGACAAGCTTGCTTTCACTGGATCAACTGCAACTGGAAAAATTGTACTTCAATTGGCTGCAAGGAGCAATCTTAAGCCAGTGACTTTAGAGCTTGGAGGGAAATCCCCTTTCATTGTGTGTGAGGATGCTAATGTAGATGAGGCTGTTGAGCTAGCCCACTTTGCTTTATTCTTTAATCAGGGGCAATGTTGTTGTGCTGGCTCCCGTACATTTGTACATGAAAGTATATACGATGAGTTTGTAGAGAAGGCGAAAGCACGTGCTTTAAGACGCACCGTTGGTGATCCATTCAAGGCAGGCATTGAGCAAGGCCCCCAGATTGATTCAGATCAATTTGAGAAGATCCTGAGATACATAAGATCTGGTGTCGAAAATGGAGCCACCCTTGAAACCGGAGGTGAGAGATTTGGCAAAGAGGGCTTCTTCATTAAGCCTACAGTTTTCTCTAATGTTCAGGACGGCATGTTGATAGCACAGGACGAGATATTTGGACCAGTGCAGTCCATCCTGAAATTCAAGGACCTTGGTGAGGTGATAAGAAGGGCAAACGCCACTAGTTATGGGCTGGCCGCAGGAGTCTTTACCCAGAACTTAGACACAGCCAACACCTTGACCCGCGCACTAAAGGTGGGCACAGTATGGATTAACTGCTTTGATGTGTTTGATGCAGCGATTCCTTTTGGTGGGTACAAGATGAGTGGGCATGGCAGAGAAAAGGGTATTTACAGTCTTCAAAACTACCTGCAAGTGAAGGCTGTTATTACTCCCTTGAAGAACCCCGCGTGGTTATAA 1617 46.32 MTIPRISSLLSRSFTSSASSALLSSIGRNSSRRGGIFRYSTAAVVEEPINPSVNVNYTQLLINGQFVDAATGKTFETLDPRTGNVIASVAEGDAEDVNRAVSAARKAFDEGPWPRMSPYERSKILLRFADLLEKHNDEIAALETWDNGKPFEQAAKAEVPLVIRLMRYYAGWADKIHGLTVPADGLHQVQTLHEPIGVAGQIIPWNFPLLMYAWKIGPALACGNTIVLKTAEQTPLSALYASKLLHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLAFTGSTATGKIVLQLAARSNLKPVTLELGGKSPFIVCEDANVDEAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALRRTVGDPFKAGIEQGPQIDSDQFEKILRYIRSGVENGATLETGGERFGKEGFFIKPTVFSNVQDGMLIAQDEIFGPVQSILKFKDLGEVIRRANATSYGLAAGVFTQNLDTANTLTRALKVGTVWINCFDVFDAAIPFGGYKMSGHGREKGIYSLQNYLQVKAVITPLKNPAWL* 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8860601 8865591 - Vvi1g738 Vvi1g738 769938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g738 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 308 497 IPR016163 GO:0016620
Vvi1g738 538 SUPERFAMILY ALDH-like 54 532 IPR016161 GO:0016491
Vvi1g738 538 CDD ALDH_F2BC 55 530 - -
Vvi1g738 538 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 28 538 - -
Vvi1g738 538 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 28 538 - -
Vvi1g738 538 Pfam Aldehyde dehydrogenase family 67 528 IPR015590 GO:0016491
Vvi1g738 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 62 526 IPR016162 GO:0016491
Vvi1g738 538 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 332 343 IPR016160 GO:0016491
Vvi1g738 538 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 304 311 IPR029510 GO:0016491
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g738 Vvi14g1384 ECH
Vvi1g738 Vvi17g722 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g738 K00128 - vvi:100267386 1045.8