Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g742 ATGGAGATCGCCGGCTCTCATGCTCACGATTCCAAGGATCTTTCTGTTTGGCCCACTCTTGCGTTGGCATTCCAAACACTTGGTGTGGTGTATGGTGATATGGGCACCAGCCCTTTATATGTCTTTTCTGATGTATTTAGCAAGGTGCCCATTGAATCAGAGGTTGATGTTTTGGGTGCTTTGTCTCTAGTAATGTACACCATTGCTCTTCTCCCTTTTGCAAAATACGTATTTATAGTGCTCAAAGCTAATGACAATGGGGAAGGAGGAACATTTGCCTTATATTCTCTGATTTGCAGGTATGCAAAAGTTAATATGCTACCAAATCGTCAAGTAGCTGATGAACAGATCTCCAGTTTTCGCCTCAAACTGCCCACTCCAGAGTTGGAAAGGGCTTTAAATATAAAAGACAGCTTGGAAAGGAGATCCTCTTTGAGAACCCTCCTCTTGTTGTTGGTTCTAATGGGAACTTCAATGATAATTGGGGATGGCATTCTAACCCCAGCAATGTCAGTCATGTCTGCTGTGAGTGGTCTGCAAGGTGAAATACGGGGATTTGGTACAAATGCTGTGGTTCTTGTCTCAGTCATAATCCTGGTGGGATTGTTTAGCATACAGCAATTTGGAACTAGTAAAGTGGGTTTCACATTTGCTCCTGCACTTGCTTTGTGGTTCTTTTGTCTGGGATCTATTGGCATTTATAACATATATAAATACGATATTACTGTCCTACGAGCATTCAATCCAGCATATGTATACTTGTTCTTCAAGAAAAACAGCACACAGGCCTGGTCAGCCCTCGGTGGCTGTGTTTTGTGCATCACAGGAGCTGAGGCAATGTTTGCTGATCTAGGGCACTTCTCTGTACGAGCGATTCAGATTGCCTTTACTTGTGTTGTGTTCCCCTGCCTTCTCTTGGCTTACATGGGCCAAGCTGCATTCCTAATGAAACACCCCCACTCAACAGGAAGGATATTCTATGATTGTGTCCCAGATGGTTTATTCTGGCCAGTCTTTGTGATAGCCACACTTGCAGCCATGATTGCCAGTCAAGCCATGATATCTGCTACATTTTCATGCATCAAGCAATCCATGGCCCTCGGATGTTTCCCAAGGCTGAAGATCATTCATACCTCGAGGAAGCTAATGGGTCAAATCTACATCCCTGTCATCAACTGGTTTTTAATGATCATGTGTGTAGTTGTAGTGGCCTCCTTCCAAAGCACCACAGACATAGCAAATGCATATGGGATAGCTGAAGTTGGTGTAATGATAGTAAGCACTACCTTGGTGACGCTTGTAATGCTTCTAATCTGGCAGATCAACTTGTTTCTTGCTCTGTGTTTCCCACTGGTATTTGGAACAGTAGAGCTCATCTACCTATCGGCAGTTCTAACAAAAATCAAAGATGGTGGTTGGCTTCCACTTGTTTTTGCATCTTGCTTCCTCTGCGTGATGTACATTTGGAACTACGGGAGCGTGCTCAAGTACCAGAGTGAGGTCAGGGAGAAGATCTCCATGGACTTGATGCTTGATCTAGGGTCCAGCCTTGGGACTGTACGAGTTCCAGGAATCGGATTGCTGTACAATGAGCTAGTCCAAGGCGTTCCCTCCATTTTTGGGCAGTTCCTACTGAGCCTTCCAGCCATCCACTCTACCGTAGTGTTTGTTTGCATTAAGTATGTCCCAATCCCAGTTGTCCCTCAAGAGGAAAGGTTCTTATTTCGAAGGGTTTGTCCTAGAGACTACCATATGTTCCGTTGTGTTGCTAGATATGGTTACACAGATATCCGGAAGGAAGATCACCACTCATTTGAGCAACTTTTAGTTGAAAGCCTCGAGAAGTTCTTGAGAAGGGAATCTCAAGATCTTGCCTTGGAAAGCAATTTAAACGAGTTGGATTTTGATAGTGTTTCAGTGAGGTCAAGGGACAGAGAAACCACCTCAGGATTGCCATCAGATGAAGATCCAAGCTTGGAGTATGAGCTTTCTGCTCTCAAAGAAGCAATGAATTCAGGATTTACTTATTTGCTTGGGCATGGTGATGTAAGGGCCAAAAAGAATTCTTGGTTCATCAAGAAACTGGCCATAAACTATTTCTATGCATTCTTGAGAAGGAACTGCAGAGCTGGAACAGCCAATCTGCGTGTTCCTCACATGAATATCATGCAAGTTGGGATGACATACATGGTCTGA 2196 43.94 MEIAGSHAHDSKDLSVWPTLALAFQTLGVVYGDMGTSPLYVFSDVFSKVPIESEVDVLGALSLVMYTIALLPFAKYVFIVLKANDNGEGGTFALYSLICRYAKVNMLPNRQVADEQISSFRLKLPTPELERALNIKDSLERRSSLRTLLLLLVLMGTSMIIGDGILTPAMSVMSAVSGLQGEIRGFGTNAVVLVSVIILVGLFSIQQFGTSKVGFTFAPALALWFFCLGSIGIYNIYKYDITVLRAFNPAYVYLFFKKNSTQAWSALGGCVLCITGAEAMFADLGHFSVRAIQIAFTCVVFPCLLLAYMGQAAFLMKHPHSTGRIFYDCVPDGLFWPVFVIATLAAMIASQAMISATFSCIKQSMALGCFPRLKIIHTSRKLMGQIYIPVINWFLMIMCVVVVASFQSTTDIANAYGIAEVGVMIVSTTLVTLVMLLIWQINLFLALCFPLVFGTVELIYLSAVLTKIKDGGWLPLVFASCFLCVMYIWNYGSVLKYQSEVREKISMDLMLDLGSSLGTVRVPGIGLLYNELVQGVPSIFGQFLLSLPAIHSTVVFVCIKYVPIPVVPQEERFLFRRVCPRDYHMFRCVARYGYTDIRKEDHHSFEQLLVESLEKFLRRESQDLALESNLNELDFDSVSVRSRDRETTSGLPSDEDPSLEYELSALKEAMNSGFTYLLGHGDVRAKKNSWFIKKLAINYFYAFLRRNCRAGTANLRVPHMNIMQVGMTYMV* 732
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8922596 8933413 + Vvi1g742 Vvi1g742 769942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g742 731 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 8 731 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi1g742 731 TIGRFAM kup: potassium uptake protein 22 731 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi1g742 731 PANTHER POTASSIUM TRANSPORTER 12-RELATED 8 731 - -
Vvi1g742 731 Pfam K+ potassium transporter 23 596 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g742 Vvi14g1387 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g742 K03549 - vvi:100257092 1380.93