Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g75 ATGTATCGGCCGGTGGCTACAGCCCCGACTCAGGGTGGAATAGCCACCGAAAGTGCAGACTATGTGGTTGAACTCAATCAAGTTCCACGGTGGAGTGATGCGGAGCATAAATCTTCTTTGGAATATGACAATGAAGATTCTTCTTTTCCAACTTCATACTTTCCAGATCCTCTAACCTCAACATCTGAGGCAGAGAGTGGTGGCAATGGGATGATGTCCAGGTTTCCTGTTAATCATGAAATTAACTCAAAGATATATCTATGGAGGGGAAATCCATGGAATCTTGAGGTAGATGCGGTTGTTAACTCCACAAATGAGAACTTGGATGAAGCACACAGCAGCCCTGGTCTGCATGCTGCAGCTGGGCCTGGTCTAGCAGAAGAGTGTGCAACATTGGGTGGATGCCGTACAGGGATGGCTAAAGTAACTAATGCGTACGACCTTCCTGCTAGGAGGGTTATTCATACTGTGGGTCCCAAGTATGCAGTAAAATATCATACTGCTGCAGAGAATGCTTTGAGTCACTGCTATCGGTCTTGCCTTGAACTTCTTATAGAAAATGGCCTTCAGAGCATTGCTATGGGCTGCATATATACAGAGGCTAAAAATTATCCTCGGGAACCAGCTGCACATGTGGCTATAAGGACAGTGAGGCGGTTTCTTGAGAAGCAGAAGGATAAAATTACTGCTGTTGTCTTCTGTACTACCACAGCAAATGATACTGAGATATATAAAAGATTGCTTCCACTTTATTTTCCTCGGGATAAACATGAAGAGGAGGTGGCAATGTCAAAGCTTCCTGCAGATGTAGGGGATGAGAATGGTGAAACAATCATAGATGAACGTAAAATCAGAATAAAGCCTCTGCCCAAAAAGACTGCTCCTAAACCTCCCAAAGCCCCAGTTGATCTTCCTGTCAGTGATGTTGGATTGATACGGCGCAGGAATTCATCATATTTGGATTCATATCTGGATCCTGCTTTCATGTCCTTAATTAAAGATCCAGATCAGAGGCGTAAAGAGCAATGGGAAAAAACTGCTCAAGCACAGAGTGGATGGAATTGTGCTAAATTGCTTGGATTTGGTGACCTTGGTGGACCTCCATTATCTGCTGCTGAAGAATACTCTCTTCATTCTAGATACCTTAGTAAAGCAAATTCTCTTAATCTTTCTGAAATTGCAGAAATGAAAATTGTTTACCGTGGTGGTGTAGACAGTGAGGGCCGTCCCATAATGGTTGTTGTGGGAGCACATTTTCTTCTGCGATGTCTGGATCTTGAGCGGTTTGTGTTCCATGTAGTAAAGGAGTTTGAGCCTGTGATACAGAAGCCTTATACTATTGTTTACTTCCACTCAGCAGCATCGTTGCAGATCCAACCGGATTTGGGATGGATGAGGAGATTACAGCAAATACTTGGTCGGAAACACCAGCGTAACCTTCATGCAATTTATGTTCTTCACCCGACATTTGGATTGAAGGCTGCAGTTTTTGCTCTGCAATTGTTTGTAGATAATGTGGTGTGGAAGAAAGTGGTATATGTTGACCGACTCATGCAGCTGTTCAGATACGTTCCACGTGAGCAGTTGACAATCCCCGACTTTGTGTTTCAGCATGATTTAGAAGTGAATGGAGGGAAGGGCCTCATGGTGGATCCCAGAACAAAATATGTATATCATCGGCCATGA 1686 43.83 MYRPVATAPTQGGIATESADYVVELNQVPRWSDAEHKSSLEYDNEDSSFPTSYFPDPLTSTSEAESGGNGMMSRFPVNHEINSKIYLWRGNPWNLEVDAVVNSTNENLDEAHSSPGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARRVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLQSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDKITAVVFCTTTANDTEIYKRLLPLYFPRDKHEEEVAMSKLPADVGDENGETIIDERKIRIKPLPKKTAPKPPKAPVDLPVSDVGLIRRRNSSYLDSYLDPAFMSLIKDPDQRRKEQWEKTAQAQSGWNCAKLLGFGDLGGPPLSAAEEYSLHSRYLSKANSLNLSEIAEMKIVYRGGVDSEGRPIMVVVGAHFLLRCLDLERFVFHVVKEFEPVIQKPYTIVYFHSAASLQIQPDLGWMRRLQQILGRKHQRNLHAIYVLHPTFGLKAAVFALQLFVDNVVWKKVVYVDRLMQLFRYVPREQLTIPDFVFQHDLEVNGGKGLMVDPRTKYVYHRP* 562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 741221 751123 + Vvi1g75 Vvi1g75 769275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g75 561 Pfam Macro domain 101 213 IPR002589 -
Vvi1g75 561 CDD Macro_GDAP2-like 83 251 IPR035793 -
Vvi1g75 561 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 386 535 IPR001251 -
Vvi1g75 561 PANTHER APPR-1-P PROCESSING ENZYME FAMILY PROTEIN 1 541 - -
Vvi1g75 561 SMART YBR022w_8 84 213 IPR002589 -
Vvi1g75 561 MobiDBLite consensus disorder prediction 44 68 - -
Vvi1g75 561 SUPERFAMILY CRAL/TRIO domain 390 529 IPR036865 -
Vvi1g75 561 CDD SEC14 396 532 IPR001251 -
Vvi1g75 561 Gene3D Leucine Aminopeptidase, subunit E, domain 1 15 257 IPR043472 -
Vvi1g75 561 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 1 541 - -
Vvi1g75 561 SUPERFAMILY Macro domain-like 73 281 IPR043472 -
Vvi1g75 561 ProSiteProfiles Macro domain profile. 72 252 IPR002589 -
Vvi1g75 561 Pfam Divergent CRAL/TRIO domain 408 539 IPR001251 -
Vvi1g75 561 MobiDBLite consensus disorder prediction 38 71 - -
Vvi1g75 561 SMART sec14_4 392 538 IPR001251 -
Vvi1g75 561 Gene3D - 391 542 IPR036865 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g75 K24997 - vvi:100247494 1098.19