Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g76 ATGGTACAATGTGTGTCAGTAAGCACTCTGACAACCTCTGGAAATGGTGGGGTTTATGGGTCCACTGCTTTATGGGGGAGACATTTCCAGTTAATGAGAAAAACCCAGATTCGCACAGGGAGTGAAAGAAATTTTCTTTGGCATCACTGTGCACAGAGATTATTCTTTGCCGGTCAACTTGTTATGCAGAGGCAAAGGAATTTGAGGGTTGAAGCTGGATGGCTGTTTAAAGGTGGTGGTGACCAGGGGTTAGATGCAAGCTCAGAGTGTAGTGAGAGTGCTAATGAGGATATTTTGATTTTCTTTTTCCAGCTGGACTTGGCGACTCGAGTACAGTATGCTTTGAATACGGAGCAGTATGAAATAGCGCAACAACTGAGAGATAAGCTGACTGAGGTTGAAGCAGAGGTTGTCAAGCAGCGAGAAGCAAAAAGGGGATCCACATCAAAGAGTGAAGCTCAAGACAAAGCTTTAAGTATGATACGTCTACGGGCAGACCTGCAGAAAGCGATTGAGGCAGAAAACTATGCATTGGCAGCTGAGTTGCGAGATGAAATTAACAAACTAGAGGCAGAGTCTCTGGCTGCATCAGCAAATGCTCTGGTGTATGAAAATACACCATATGCATTTCGTTTGGGCCAGAAAGTGAGGCATAAAGTGTTTGGCTATTCTGCTGTGATTTGTGGAATGGATCCAGTGTGCTGTGAATCAAGTTCATGGAGGGAAAGCGCACATGTTGATAAGTTGACTCGGGGTTCTAATCAGCCATTTTATCAGGTATTGGTTGATGTACATGTAGACCCCAATCTATTAGTGGCATATGTTCCAGAGGAGAATTTGCTGGTCCCTGATGGACCAAGACCAAACAAGGGCAGGTTTGATCACCCCTATCTTTCTTTTTTATTTTACGGCATGGATGCAGCTGGAGATTTCATTCCAATCAAGCAGCTCCGGGAGAAGTACAATAGGCCCCGGCATGAAGTGCCTGGTGATCCACCAGGCGAGGGTGGAGAAGATGCTTAA 1023 45.26 MVQCVSVSTLTTSGNGGVYGSTALWGRHFQLMRKTQIRTGSERNFLWHHCAQRLFFAGQLVMQRQRNLRVEAGWLFKGGGDQGLDASSECSESANEDILIFFFQLDLATRVQYALNTEQYEIAQQLRDKLTEVEAEVVKQREAKRGSTSKSEAQDKALSMIRLRADLQKAIEAENYALAAELRDEINKLEAESLAASANALVYENTPYAFRLGQKVRHKVFGYSAVICGMDPVCCESSSWRESAHVDKLTRGSNQPFYQVLVDVHVDPNLLVAYVPEENLLVPDGPRPNKGRFDHPYLSFLFYGMDAAGDFIPIKQLREKYNRPRHEVPGDPPGEGGEDA* 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 751778 759740 + Vvi1g76 Vvi1g76 769276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g76 340 Pfam Hemimethylated DNA-binding protein YccV like 209 307 IPR011722 GO:0003677
Vvi1g76 340 PANTHER SI:DKEY-261L7.2 88 333 - -
Vvi1g76 340 Coils Coil 172 199 - -
Vvi1g76 340 SUPERFAMILY YccV-like 209 306 IPR036623 GO:0003677
Vvi1g76 340 Coils Coil 116 143 - -
Vvi1g76 340 Pfam UvrB/uvrC motif 161 191 IPR001943 GO:0005515
Vvi1g76 340 Gene3D - 207 309 IPR036623 GO:0003677
Vvi1g76 340 SMART YccV_like_2_a 209 313 IPR011722 GO:0003677
Vvi1g76 340 PANTHER SI:DKEY-261L7.2 88 333 - -
Vvi1g76 340 TIGRFAM yccV: hemimethylated DNA binding domain 208 311 IPR011722 GO:0003677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g76 - - vvi:100266199 650.588