Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g767 ATGCCTTTTGGGTTGGTCACAGCATGGAATAAGCGCAGGAGAAGCAAGTCTCAGGATCACTCTGACCCTTGGATGTATAAACCTGTGGAGTACTGGCAGCTGGATGATCAAAATCCATCTACAAAAAGACGGCATGCATCATCAGTTTTCACGCTCAAGGAAATGGAAGAGGCAACATGCTCTTTCAGTGATGAGAAATTGGTGGGTAAAGGAGGATTTGGCCGAGTTTACAGAGGTACTCTGCGGTCAGGAGAGGTTGTAGCAATCAAGAAAATGGAACTGCCTCCATTTAAAGAGGCTGAAGGAGAACGCGAGTTCAGGGTAGAAGTTGATATCTTGAGCAGACTCGACCACCCAAATCTGGTTTCCTTGATAGGCTATTGTGCTGATGGAAAGCAGCGGTTTCTAGTTTATGAATACATGCACAATGGGAACCTACAAGATCATTTAAATGGAATCCAGGACACCAAGATGGATTGGCCTTTGAGGCTCAAAGTGGCCCTGGGAGCAGCAAGGGGACTTGCTTATCTCCATTCAAGTTCCAATGTTGGGATTCCCATTGTTCATAGAGATTTCAAGTCCACCAACATTCTTTTAAATTCCAACTTTGACGCTAAGATATCTGATTTTGGGCTTGCCAAGTTGATGCCGGAGGGCCAGGATAGCTATGTGACTGCCAGAGTACTTGGCACTTTTGGCTATTTTGATCCTGAATACACATCGACAGGGAAACTCACTTTACAAAGTGATGTTTATGCATTTGGAGTTGTACTACTTGAGCTTTTGACTGGACGACGAGCAGTGGACTTGAACCAGGGACCCAATGATCAAAACCTTGTACTACAGGTTAGGCATATATTGAATGATAGGAAGAAGTTGCGTAAGGTGATAGATCCAGAAATGGGTCGAAGTTCATACACAGTGGAGTCCATAGCAATGTTTGCAAACCTGGCTTCTAGATGTGTCCGTACAGAGAGTAGTGAGAGACCCTCAATGGCAGAATGTGTAAAGGAACTCCAACTGATTTTCTATACAAATACAAAAGGCTTGGGCATGCTCTAA 1062 44.26 MPFGLVTAWNKRRRSKSQDHSDPWMYKPVEYWQLDDQNPSTKRRHASSVFTLKEMEEATCSFSDEKLVGKGGFGRVYRGTLRSGEVVAIKKMELPPFKEAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKQRFLVYEYMHNGNLQDHLNGIQDTKMDWPLRLKVALGAARGLAYLHSSSNVGIPIVHRDFKSTNILLNSNFDAKISDFGLAKLMPEGQDSYVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRHILNDRKKLRKVIDPEMGRSSYTVESIAMFANLASRCVRTESSERPSMAECVKELQLIFYTNTKGLGML* 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9342574 9344861 + Vvi1g767 Vvi1g767 769967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g767 353 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL28-RELATED 1 352 - -
Vvi1g767 353 ProSitePatterns Protein kinases ATP-binding region signature. 68 91 IPR017441 GO:0005524
Vvi1g767 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Vvi1g767 353 PIRSF ILK 33 349 - -
Vvi1g767 353 Pfam Protein kinase domain 63 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi1g767 353 Gene3D Transferase(Phosphotransferase) domain 1 141 349 - -
Vvi1g767 353 CDD STKc_IRAK 68 342 - -
Vvi1g767 353 SUPERFAMILY Protein kinase-like (PK-like) 48 344 IPR011009 -
Vvi1g767 353 Gene3D Phosphorylase Kinase; domain 1 29 140 - -
Vvi1g767 353 ProSiteProfiles Protein kinase domain profile. 62 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi1g767 353 PANTHER OS01G0750732 PROTEIN 1 352 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76521 PF00069 Pkinase 2.00E-49 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g767 - - vvi:100251958 712.605