Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g779 ATGTCACTCTCATACTCTGACCGCTTCTCCGACCTTCTCTGCGGCGAGGACTCTAGCATCTTATCCGGCGACTTGCCGGAGTGCTCTTCAGACCTCGAATCTCCGACTGATATTGAGGAATCAATAGCTGGATTTATTGAAGATGAAAGGAACTTCGTGCCTGGATTCGATTACTTGGCCAGGTTTCGGTCACACTCGCTCGACGCCTCCGCTCGAGAGGAATCTGTTGCATGGATTCTTAAGGTGCAAGCCTACCATGGTTTCCAACCACTAACGGCGTATCTCTCCGTCAACTACTTGGACCGTTTCCTCTATTCTCGCCGTTTGCCGCAAACAAATGGGTGGCCACTGCAACTCTTATCTGTTGCTTGCTTGTCATTAGCTGCAAAGATGGAGGAACCCCTAGTTCCTTCTCTATTGGATCTCCAGGTTGAAGGTGCAAAATTTATATTTGAATCAAAAACAATTCGTAGGATGGAGCTCCTTGTACTTGGTGTTTTGGATTGGAGACTAAGATCGATAACACCTTTCAGTTTCATCGGGTTCTTTGCATACAAGCTGGATTCAAGTGGAAGTGTGATTGGATTTCTTATTTCCAGGGCCACGCAAATTATCTTGTCTAACATCCAAGAGGCGAGTTTCCTGGAGTATTGGCCGTCATGCATAGCTGCAGCAGCCATACTTTGCGCAGCCAATGAGATTCCAAAGTTGTCGCTTGTTGATCCTGAACGTGCAGAATCATGGTGTGATGGACTGAGCAAAGAGAAAATCATCAGTTGCTATCAGTTAATGCAAGAAATCACGGTTGACAATAACCGGAGGAAGCCTCCAAAACTCTTACCACAGCTTCGAGTAACAATTCGGGCCAGAGTTAGGTCGTCTGGCTCCTCATCCTCATCATCCTCATCATCCTATAAGAGGAGAAAATTAAATAACTGCTTATGGGTAGACGATGACAAGGGGAACGGCGACTAA 975 46.36 MSLSYSDRFSDLLCGEDSSILSGDLPECSSDLESPTDIEESIAGFIEDERNFVPGFDYLARFRSHSLDASAREESVAWILKVQAYHGFQPLTAYLSVNYLDRFLYSRRLPQTNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKFIFESKTIRRMELLVLGVLDWRLRSITPFSFIGFFAYKLDSSGSVIGFLISRATQIILSNIQEASFLEYWPSCIAAAAILCAANEIPKLSLVDPERAESWCDGLSKEKIISCYQLMQEITVDNNRRKPPKLLPQLRVTIRARVRSSGSSSSSSSSSYKRRKLNNCLWVDDDKGNGD* 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9503469 9506746 + Vvi1g779 Vvi1g779 769979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g779 324 SMART cyclin_7 77 165 IPR013763 -
Vvi1g779 324 CDD CYCLIN 78 164 IPR013763 -
Vvi1g779 324 Gene3D - 46 236 - -
Vvi1g779 324 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 312 - -
Vvi1g779 324 Pfam Cyclin, N-terminal domain 44 171 IPR006671 -
Vvi1g779 324 Pfam Cyclin, C-terminal domain 174 275 IPR004367 -
Vvi1g779 324 Gene3D - 55 172 - -
Vvi1g779 324 SUPERFAMILY Cyclin-like 156 269 IPR036915 -
Vvi1g779 324 SMART Cyclin_C_2 174 305 IPR004367 -
Vvi1g779 324 ProSitePatterns Cyclins signature. 72 103 IPR006671 -
Vvi1g779 324 PANTHER CYCLINS 1 312 IPR039361 -
Vvi1g779 324 SUPERFAMILY Cyclin-like 36 171 IPR036915 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g779 K18810 - vvi:100255261 625.55