Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g784 ATGGGTCGACCTGAGCCTTGTGTCTTGTTCGCTCAGACATTCGTTCATCCCCAACTAGACGAGTACGTCGACGAGGTAATATTTGCCGAACCTGTTGTGATCACTTCGTGCGAGTTCCTTGAACAAAATGCTTCTTCAGTTTCTCCAGTAATAACACTTCTTGGGGCTACTTCCCCACCTTCATTTGCTTTGGAGGTTTTTGTTCAGAGTGAAGGGGAAACAAGGTTTAGGCGCTTGTGTCAACCTTTTCTTTATTCTCACTCTTCATCAAATGTGCTAGAAGTTGAGGCTGTAGTAACTAATCATCTGGTTGTTAGGGGCAGCTACCGCAGCCTTAGTTTGGTCATATATGGAAACACAGCTGAGGACCTGGGGCAATACAATATAGAGTTTGATTTAGATAGCTCTTTGACTAATGTTGTTTGTTCCTCTGAAGGGAAGCTTGATGACCTCCCTCCTGCATTACATTCAAAAAATCTAACAATTGAGGAATCTATATCCTCTCTGAAGGCGTTATCCCTACCAGTTGCTGCATCTGATATATCTATTGAGATTAAGCAGTTTTTACAGTTGATGTTCAAGATATTGGAGTTGACAAACCTTGGAGATGCAGTCCATAAAGTTTTAGACACTGTTGTCTCGGCAGCCTCTTCTTACAGTGCCCATGACTTGCACTATGCAGCAGTCAATCAGAAGAAATTCACACAGAGTACCAATAATAGCAATGAGGAGTCTCATTTTGTTCTTGATGCAGCTAAAAAAGAGCTTCTTGATCTCTATAAAACCCTTCAAGATGAATCAGGAAATTCATCTGTGGAGTTATTGGAAGAATGCAGTTTTCTTGAATCAGAGATTGATTTGGCTTCTTCCAAAGAATTAATGGATATGTTAATCCAGCATTTTCTCTTCAAAAGGAACTTCCTGAGTGTTGGACATTACCACCTTTCTCAGAAGAAGAAAGTGATTTTGGTGTTGAGTGTGGCACTTTTCTTGTGTTCTGCTAAAGAGAGCTGCTTTCAGTTTGTTAATGGTGGTGGAATGGAGCAGCTTGCTTGTGTGTTCAGTGATGATTTGCAGAATTCTACAGCCATTACATTAATGCTACTTGGAGTTGTTGAGCAGGCTACTCGCTATTCTATTGGTTGTGAAGGGTTTTTAGGTTGGTGGCCCCGTGAAGATGACAACGTCCCATCTGGTATTAGTGAAGGTTATAGTCGATTATTGAAGTTGTTATTAGAAAAACAGCGTCATGATATTGCTTCTCTTGCAACTTATGCCCTTCATCGCTTGCGTTTTTATGAAGTTGTTTCTAGATATGAGTGTGCAGTACTGTCTGTATTGGGAGGCCTTTCTACTGTTGGTAGGGTTACAGGTGCAACATTGGACATGCTCATCAGTGCTAAAGTGCAACTTAAAAAGCTCCTGAAATTGATAAACTCACGTGGTCCAATTGAAGATCCTTCTCCAGTTGCCTGTGCAAGTAGATCATTGATTCTTGGTCAAACAGAAGGATTGTTGTCATATAAAGCAACTAGTAACTTGATTGGTTTGTCAAATTGTTGCTTTTCAAGTCGGGATATTGACATACATTTGCTATCACTTGTCAAGGAGAGAGGATTTCTTCCTTTATCAGCTGCACTGTTGTCATCTTCTATCTTGCGTTCAGAAGTGGGACATGCTATGGACATATTTGTGGACATTACATCATCTATTGAGGCCATCATTCTGTCTCTTCTTTTTTGTCGCTCAGGGTTAATCTTCCTACTGCTTCACCCTGAACTTTCTGCAACGGTGATTCTTGCCTTAAGAGGTGTCGATGACTTTCATAAGGAAGACTGTGCTCCTCTTCGATATGCATCTATTTTAATTTCCAAGGGTTTCTTTTGTCGCCCACGGGAAGTTGGCTTGGTTGTTGAGATGCATTTGAGAGTGGTTAATGCTGTAGACCGTTTGCTTTCTTCAACTCCACAATCAGAGGAATTTTTGTGGGTGTTATGGGAGTTGTGCGGTCTTTCTAGGTCAGATTCTGGGCGCCAAGCTTTGTTGGCTTTAGGACACTTTCCGGAGGCTGTGCTTGTTTTGATGGAAGCATTACATTCTGTCAAGGAATTGGAGCCGGTTACCACCACTGGCACTTCACCGCTAAATCTTGCAATCTTTCATTCAGCTTCTGAGATATTTGAAGTTCTTGTTACTGATTCAACTGCATCTTCTTTGGCTTCTTGGATTGGGCATGCTATGGAGCTTCATAAAGCTTTACATTCCTCGTCCCCTGGATCCAATAGAAAAGATGCTCCGACACGGCTATTGGAGTGGATAGATGCTGGTGTAGTTTTTCATAAAAATGGGGTAACTGGTCTTCTACGATATGCTGCTGTCTTAGCTTCTGGAGGAGATGCACACTTAACTTCAACAAGCATTCTAGGATCTGATTCGATGGATGTTGAGAACGCTGTTGGAGATTCTTCCAGTGGTTCTGATACTAATGTTATAGAGAATCTTGGAAAACTCATTTCTGAAAAATCTTTTGATGGTGTTACCCTTCGGGACTCTTCTGTGGCACAGTTAACAACAGCATTTCGAATTTTGGCATTCATTTCAGAGAACTCGGCTGTTGCAGCTGCTTTATATGATGAAGGTGCAATAATAATTATCTATGCAGTGCTAGTTGACTGCAGATTCATGCTTGAGCGGTCCTCTAACAATTACGATTACCTTGTTGATGAAGGCACAGAATGCAATTCTACCTCAGATCTGCTACTGGAGCGTAGTCGTGAAAAGAGCCTAGTTGATCTTTTGATACCTCTTTTGGTATTGCTGATCACCCTTCTGAAGAAACTACAGGAAGCTCAGGAGCAGCACAGGAATACAAAACTAATGAATGCCCTTCTACGATTGCATCGAGAAGTAAGCCCAAAGTTAGCTGCATGTGCAGCTGATTTGTCCTCTTCTTACCCTGATGCTGCACTTGGTTTCGGGGCTGTCTGTAATCTTCTTGTGTCGGCACTTGCTTGTTGGCCTATATATGGTTGGACTCCTGGCCTTTTTCATTCTCTCCTTGCCAGTGTTCAAGCTACTTCATCTCTGGCCTTGGGTCCAAAGGAAACTTGCAGTTTGCTATGTATTTTGAACGATTTATTTCCTGAAGAAGGTGTCTGGCTTTGGAAGAATGGAATGCCCTTGTTGAGTGCTGTTAGGACATTGGCTGTGGGGACATTATTAGGGCCTCAGAAGGAGAGAGAGGTTAATTGGTATCTGCATCCTGGACACCCTGAGGTGCTGCTTAACCAATTGACACCGCAGCTTGACAAAATTTCACAAGTTATCCTACATTATGCAATGACTTCATTGGTGGTCATACAAGACATGCTTAGAGTTTTCATAATTCGAATTGCCTGCCAAAAGGCTGACAATGCTTCTTTGCTTTTGCAACCCATCATGTCATGGATACGTATGCGCCTTTCCGAGTCATCTTGTCAAACAGATGTGGATGCTTATAAGATTTACAGATTGCTTGATTTTCTTGCTTGCTTGTTGGAGCATCCATGTGCCAAGCCACTACTATTAAAGGAAGGTGCCATTCAGATGCTAATCAAAGCACTTGAGAGGTGTGTTGATGCCACTGAATCAGATGGAAAACAGTTGTCAGATGGTAGAAATTCTGCTAAATGTAGTCTCACTGCATTCAGTTGGTGCCTCCCTCTATGCAAGTCCTTATCACTAATTTGTGGCTCTCATATGTCTCGGCATTACATTGGGAATTATGCTAAGAATGATTTTGAACACTTGAGTAGTGAAGATTGTTCATTGATTTTGCCCTATCTGCTGAAGTTATGTCAGATTCTACCTGTTGGAAGAGAATTGCTGGCTTGTCTTACAGTTTTTAAAGAATTAGGTTCATGTAATGAAGGTCAAAATGCCCTGATGGCTGTTTTCTTGCGAGCTCGCTCTAGTGATGAAGAACTTGAACTAGAAAAGGGGCATGAAAGAGGTGGGAACTATAATGTTCTTAATGAATATGAATGGATGAAGTTGCCTCCTTTACTATGTTGCTGGACAAAGTTATTGAGATCAGTTGACCCAAGCGATGGTTTTCCAGCCTATGCAATTGAGGCTGTTGGTGCATTGTCTTTGGGTGCTTTGCGCTTTTGCATGGATGGAAAAAGTTTGAACTTGGATAGGGTTTTCGCAATGAAATTCCTTTTTGGCCTACCTCATGATTTGAGTGGGATGGATGATTTTCCTGAAGAAAACATACGATACATACAGGAATTAACAACACTGTTAGGTTCAAAGGTTACTGATGAGGACTATTCAGCTAAATCTGATATGAAGACTACACTATGTCGGGCTTCAGATTATGCAAAGTCATTGTTGTTGATGTTGCAAAATCCTGCTGGTTCACTTGATTTGGGTGATATTATTTCTAGTGAAGATGTTCCTTTATCGCCAAATGATGTTATACTTTCATCAAGGATACATCAGATGATCGATAACAGTGCTGAAAAGGTAGAAGATTACTGTTGCTTAGGTGGGCTTGAAGATAAGTTTCTGTGGGAATGTCCAGAAACTTTACCCGATAGATTGTTGCAGACAACTCTTCCAGCAAAGAGGAAAATGTCATCACTGGAGGGCCCAAGTAGGCGTGCCAGGGGAGACAATTCCCCAGCTGAAACAGTGGCCCAAGGTGCATTTTCACGGGCATTGGGACCACCCTCTGCCTCTTCAGGTCCTAGCCGCCGGGATACCTTTCGCCTGCGCAAACCAAATACAAGCAGGCCCCCTTCTATGCATGTGGATGACTATGTTGCCAGAGAGAGAAATGTAGATGGTGTTTCCAATTCTAATGTAATTGCAGTTCAACGCATAGGAACTACTGGTGGGAGACCTCCATCAATTCATGTAGATGAATTCATGGCCAGACAGAGAGAACGCCAGAACCCTGTGGTGTCGGCAGTTGGGGAGGTGGCAGCACAAGCAAAAAATGCTGCTCCGGAGAATGATGCAGATATGGAGAAGTTCAATAAATCTAGGCAGATAAAAGCAGATCTTGATGATGATCTTCAGGGCATTGATATTGTGTTTGATGGTGAGGAGTCCGAACCTGATGAAAAACTACCTTTTCCCCAACCAGATGATAATCTGCAGCAGCCTGCTTCTGTTATAGTTGAGCAAAGTTCTCCCCGCTCAATTGTTGAAGAGACAGAGAGTGATGTGAATGAAAATAGTCAGTTTTCTCGCTTAGGTACACCACTTGCATTGAATGTGAATGAAAATCCTGAAAGTGAGTTTTCTTCAAGGATGTCAGTTTCCCGCCCTGAGAGGCCATTGACTCGAGAACCCAGTGTTTCTTCAGAAAAGAAGTATTTTGAGCAGTCTGATGACATGAAGAACGTTATCCCTGCTATGACCCCTAGCAGGTATGATTCTGCCGGAGCAGCAATTAGTTCTGGGTTTCCTGCTTCTACCTATGGTAAAGCTTCTGTATCATCTGTACCATTAATGGTTGATTCTAGGATGGTTCAACCTAATTTCTACTTGAAGAACAGTTCACAGCAAGCTGGTAATATGGCTCTAGCTACAGGATCTCAAGGACTTTATGATCAGAAATTTATGCTGAATCAACCTCCTTTACCTCCAATGCCGCCACCACCAACGATCTCACCCATAATATCTCAAGCCCCTGACCCTGCTCTGAGTCAATCATCTTCATTTGTGAACACTGCAACAGATGTGCAGCCACCACTGCCCACTGCCTTCCAAGTTCAGTCAGAGTATCTTTCTGCTTTCACCAACAGTTCTACATCATTAGCTTCTTCCCTTTCAATGCCAGATTCTAAATACTCAAGGGCCTCACTCTCTTCACCCAGTGGATCTGCTAGGCCTCCACCTCCACTTCCTCCTACCCCACCTCCTTTTTCGGCTGCTCCATTTACTTTAGCATCTTTAAAAGTTTCTGTTTCCTCATCGTCAGTATACAATCAAACAAGTGGTGCAACAACTGATCTTCCTCAGATCTCTGGTGCATCTTTAACTGATGCTCGATTAGGCAACCTCTCAGCATCAGGGACTAGACTTTCTTCTTATCCTCCTCCACTAGTGCCTCCCTTGGTTTTCAGTAGGCCTGCTTCAATACCTGTAAGCATTTATGGAAGCACCACAACCCAGCAGCAGGGCGAGAATCCATCAAATACTATACAGAATCCTCCCATTCCTCAACTTTCCATTCAATCAATACAATCTTTTGCTCAGTTGCAGCCACTGCAGCCACCACAGCTTCCACGTCCCCCACAGCCACCTCAGCATCTTAGGCCACCTGTTCAACCTTCACAACAACCAGAGCAAGGGGTGTCTTTACTACAGAGTCCAATTCAATTGCCAGTGCAGCCATTACAGATGTTGCAACAGCCCCAAGTTTCTCCTCTTCATGTCTATTATCAACAGCAACAGCAGGAAAACTTTCCACATGTGCAGCAACAGCAGCAAGTTGAACATGGCCAACATCAAGTTCTACGTCAGCAAGGAGATAGTTCATCTCAGCTGGAGCAAGATTCAGGGATGTCATTACAACAGTACTTCAGTTCCCCTGAAGCTATTCAGTCTTTATTGTGTGATCGGGATAAACTTTGCCAGCTCTTAGAGCAACATCCCAAGTTAATGCAAATGCTTCAGGAAAGGTTGGGCCAGCTATAA 6693 42.85 MGRPEPCVLFAQTFVHPQLDEYVDEVIFAEPVVITSCEFLEQNASSVSPVITLLGATSPPSFALEVFVQSEGETRFRRLCQPFLYSHSSSNVLEVEAVVTNHLVVRGSYRSLSLVIYGNTAEDLGQYNIEFDLDSSLTNVVCSSEGKLDDLPPALHSKNLTIEESISSLKALSLPVAASDISIEIKQFLQLMFKILELTNLGDAVHKVLDTVVSAASSYSAHDLHYAAVNQKKFTQSTNNSNEESHFVLDAAKKELLDLYKTLQDESGNSSVELLEECSFLESEIDLASSKELMDMLIQHFLFKRNFLSVGHYHLSQKKKVILVLSVALFLCSAKESCFQFVNGGGMEQLACVFSDDLQNSTAITLMLLGVVEQATRYSIGCEGFLGWWPREDDNVPSGISEGYSRLLKLLLEKQRHDIASLATYALHRLRFYEVVSRYECAVLSVLGGLSTVGRVTGATLDMLISAKVQLKKLLKLINSRGPIEDPSPVACASRSLILGQTEGLLSYKATSNLIGLSNCCFSSRDIDIHLLSLVKERGFLPLSAALLSSSILRSEVGHAMDIFVDITSSIEAIILSLLFCRSGLIFLLLHPELSATVILALRGVDDFHKEDCAPLRYASILISKGFFCRPREVGLVVEMHLRVVNAVDRLLSSTPQSEEFLWVLWELCGLSRSDSGRQALLALGHFPEAVLVLMEALHSVKELEPVTTTGTSPLNLAIFHSASEIFEVLVTDSTASSLASWIGHAMELHKALHSSSPGSNRKDAPTRLLEWIDAGVVFHKNGVTGLLRYAAVLASGGDAHLTSTSILGSDSMDVENAVGDSSSGSDTNVIENLGKLISEKSFDGVTLRDSSVAQLTTAFRILAFISENSAVAAALYDEGAIIIIYAVLVDCRFMLERSSNNYDYLVDEGTECNSTSDLLLERSREKSLVDLLIPLLVLLITLLKKLQEAQEQHRNTKLMNALLRLHREVSPKLAACAADLSSSYPDAALGFGAVCNLLVSALACWPIYGWTPGLFHSLLASVQATSSLALGPKETCSLLCILNDLFPEEGVWLWKNGMPLLSAVRTLAVGTLLGPQKEREVNWYLHPGHPEVLLNQLTPQLDKISQVILHYAMTSLVVIQDMLRVFIIRIACQKADNASLLLQPIMSWIRMRLSESSCQTDVDAYKIYRLLDFLACLLEHPCAKPLLLKEGAIQMLIKALERCVDATESDGKQLSDGRNSAKCSLTAFSWCLPLCKSLSLICGSHMSRHYIGNYAKNDFEHLSSEDCSLILPYLLKLCQILPVGRELLACLTVFKELGSCNEGQNALMAVFLRARSSDEELELEKGHERGGNYNVLNEYEWMKLPPLLCCWTKLLRSVDPSDGFPAYAIEAVGALSLGALRFCMDGKSLNLDRVFAMKFLFGLPHDLSGMDDFPEENIRYIQELTTLLGSKVTDEDYSAKSDMKTTLCRASDYAKSLLLMLQNPAGSLDLGDIISSEDVPLSPNDVILSSRIHQMIDNSAEKVEDYCCLGGLEDKFLWECPETLPDRLLQTTLPAKRKMSSLEGPSRRARGDNSPAETVAQGAFSRALGPPSASSGPSRRDTFRLRKPNTSRPPSMHVDDYVARERNVDGVSNSNVIAVQRIGTTGGRPPSIHVDEFMARQRERQNPVVSAVGEVAAQAKNAAPENDADMEKFNKSRQIKADLDDDLQGIDIVFDGEESEPDEKLPFPQPDDNLQQPASVIVEQSSPRSIVEETESDVNENSQFSRLGTPLALNVNENPESEFSSRMSVSRPERPLTREPSVSSEKKYFEQSDDMKNVIPAMTPSRYDSAGAAISSGFPASTYGKASVSSVPLMVDSRMVQPNFYLKNSSQQAGNMALATGSQGLYDQKFMLNQPPLPPMPPPPTISPIISQAPDPALSQSSSFVNTATDVQPPLPTAFQVQSEYLSAFTNSSTSLASSLSMPDSKYSRASLSSPSGSARPPPPLPPTPPPFSAAPFTLASLKVSVSSSSVYNQTSGATTDLPQISGASLTDARLGNLSASGTRLSSYPPPLVPPLVFSRPASIPVSIYGSTTTQQQGENPSNTIQNPPIPQLSIQSIQSFAQLQPLQPPQLPRPPQPPQHLRPPVQPSQQPEQGVSLLQSPIQLPVQPLQMLQQPQVSPLHVYYQQQQQENFPHVQQQQQVEHGQHQVLRQQGDSSSQLEQDSGMSLQQYFSSPEAIQSLLCDRDKLCQLLEQHPKLMQMLQERLGQL* 2231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9565249 9637417 + Vvi1g784 Vvi1g784 769984

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g784 2230 MobiDBLite consensus disorder prediction 1757 1790 - -
Vvi1g784 2230 MobiDBLite consensus disorder prediction 1937 1957 - -
Vvi1g784 2230 MobiDBLite consensus disorder prediction 2052 2071 - -
Vvi1g784 2230 MobiDBLite consensus disorder prediction 1532 1598 - -
Vvi1g784 2230 MobiDBLite consensus disorder prediction 2153 2187 - -
Vvi1g784 2230 MobiDBLite consensus disorder prediction 1937 1973 - -
Vvi1g784 2230 Pfam Virilizer, N-terminal 8 122 IPR031801 -
Vvi1g784 2230 MobiDBLite consensus disorder prediction 1757 1772 - -
Vvi1g784 2230 MobiDBLite consensus disorder prediction 1958 1973 - -
Vvi1g784 2230 MobiDBLite consensus disorder prediction 1724 1743 - -
Vvi1g784 2230 PANTHER UNCHARACTERIZED 2056 2216 IPR026736 -
Vvi1g784 2230 PANTHER UNCHARACTERIZED 1 1910 IPR026736 -
Vvi1g784 2230 MobiDBLite consensus disorder prediction 2087 2116 - -
Vvi1g784 2230 MobiDBLite consensus disorder prediction 1879 1910 - -
Vvi1g784 2230 MobiDBLite consensus disorder prediction 2089 2107 - -
Vvi1g784 2230 MobiDBLite consensus disorder prediction 1893 1910 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g784 - - - vvi:100246722 4101.98
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g784 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008420 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 5 1 1 1 1 1 35