Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g794 ATGGAGATAAGCGGTGTTCTTTCTCGGCGAAACATGCCGGACGAGATCGGTGGTTTCGATCTTTCACCTGGCCACTCTGAAGAAGAGGCTCATGTTCTCGCTGTTGATGATAGTCTAGTTGACCGAAAGGTCATTGAACGACTGCTCAAAATTTCTTCTTGTAAAGTGACGGCGGTGGACAGCGGAAGGAGAGCTCTGCAATTTCTTGGTTTAGATGAGGAGAAGAACTCAGCTGGTCTTGATGGTTTGAAAGTGGATCTAATCATCACTGATTACTGTATGCCTGGAATGACTGGATATGAATTGCTCAAGAAGATCAAGGAATCGTCCACTTTCCGGGAAACTCCGGTGGTAATCATGTCATCAGAAAACATCCTAACGCGAATAGACAGATGTTTGGAGGAAGGTGCAGAGGATTTCATAGTAAAGCCCGTAAAATTGTCGGACGTGAAGCGGCTGAAAGATTACATGACCAGAGAAGACAGAGATGGCAATGAGGGCAGAGGCATCAATAAAAGAAAGCTGGGAGAGGCATGCGATGTCTCTCCATCCTTATCATCATCACCACCGTCCATATCTTCATCATCCTCATCATGGTCAGCGCCATCTTCTCCCACGTCGTTAGACTCTCCCACTAGACGGCTCAAAACCTCCACATGTGATTAG 666 46.55 MEISGVLSRRNMPDEIGGFDLSPGHSEEEAHVLAVDDSLVDRKVIERLLKISSCKVTAVDSGRRALQFLGLDEEKNSAGLDGLKVDLIITDYCMPGMTGYELLKKIKESSTFRETPVVIMSSENILTRIDRCLEEGAEDFIVKPVKLSDVKRLKDYMTREDRDGNEGRGINKRKLGEACDVSPSLSSSPPSISSSSSSWSAPSSPTSLDSPTRRLKTSTCD* 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9872290 9873600 + Vvi1g794 Vvi1g794 769994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g794 221 ProSiteProfiles Response regulatory domain profile. 31 158 IPR001789 GO:0000160
Vvi1g794 221 CDD REC_typeA_ARR 32 153 - -
Vvi1g794 221 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 214 IPR045279 GO:0009736
Vvi1g794 221 MobiDBLite consensus disorder prediction 181 221 - -
Vvi1g794 221 MobiDBLite consensus disorder prediction 160 221 - -
Vvi1g794 221 Pfam Response regulator receiver domain 32 150 IPR001789 GO:0000160
Vvi1g794 221 Gene3D - 29 193 - -
Vvi1g794 221 SMART REC_2 30 157 IPR001789 GO:0000160
Vvi1g794 221 MobiDBLite consensus disorder prediction 160 175 - -
Vvi1g794 221 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 10 214 - -
Vvi1g794 221 SUPERFAMILY CheY-like 30 153 IPR011006 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g794 Vvi17g678 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
14532 PF00072 Response_reg 1.30E-22 CL0304 Vvi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g794 K14492 - vvi:100263979 389.808