Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g795 ATGCTATTACTAAATTGCAGCATACATGAGGATTTGTCATTTTTTGCATACAAAAGCCCGGGAAATACCAAAATGAGAATGGGCCGCCCAAATAACTACTCCTGTTTGAAACTGTCAACAACCAAACCCCAAAAAGCACAAGACAAAACATCAACTAGAATTGCCCAAAATAAAGAAAAGAGCAACAGAGTCCGTTTTAATCCTCTCTGCAATTTTGTTGCCGGGTTGTTCTTCCTTCTGTTCCAAAGGTACACGGTTGCAAGGAGGAGAAGACAGAAAGATGGTAATGATCCACGAGGAGGTGGTGAACATGTGGTGCATCATACTGAGTTCTCAAGATTCAATGGAAATCTCAAGGGGCTGATTGTTGATGAGAATGGTTTGGACGTGCTTTATTGGAAGCAGCTTGAAGGGGGAAGCAGGAAGAATAGTTTCCGTAAAGAGGCTCTACATAATCTGAAAGATGAAGAAAAAAGGATGAGTCGGAATGGAGATCAGAGGGCAAAGCCTGAGCCTATACAAGAAATTCCTTTGCTACGAGGGAAGTCTTCAACTTCCTATGATGAAGTTCAAGAAGAAGTGGAAAATCTGAATCGGTTTTCAGCCCCCCCTCCTTTGTCACAATCTTTTGAGATTTCTCTTGAGGCTGCAGGTGGTTTTACTTCATCAACAAAAGAAGCATCATCGGTGCCCAAAGGGGTGCCTAATGGCAGTAAACTAGGAGAGTCTTCATCTGGATATAGCAAGGCAGGGACTGGAAATGGTCAGGTGGCGCTGAAGCCATTGCATTGGGATAAAGTGAACACTAACGCTAATCATTCAATGGTATGGCACAAAATTGATGGCGGTTCTTTCAGCTTCGATGGTGACCTCATGGAAGCACTGTTTGGATTTGTTGCTACTAATCGGAGATCTCCTCAAAGAAACCATAACAACCCAAATGGTGCCAGCTCAAGTCAATCGGCTCAGATTTTCATCCTTGATAGTCGAAAGTCCCAAAACACAGCAATTGTGCTCCGATCTTTAGCAATCTCGCGAAAAGAGATCCTCAACGCACTCATTGAGGGCCAAGACCTGAATGCAGATACTCTTGAAAAGCTTACAAAAATTGCCCCAACTAAAGAAGAAGAATCCCAAATCCTTGCATTCAAGGGAGACCCCACAAGACTGGCTGATGCTGAATCCTTCCTCTACCATATCCTAAAAGCTGTTCCATCAGCATTTGATCGTCTCAGTGCCATGTTTTTCAGATTGAATTATGACTCAGAGATTCTCCATCTCAGGGAATGTTTACAAACACTTGAATTGGGTTGCAAGGAGCTTCGAACTCGTGGACTTTTCTTAAAACTTTTGGAAGCCATACTCAAGGCAGGCAATCGCATGAATGCTGGAACTTCCAGAGGGAATGCCCAAGCTTTTAACCTTGCTGCTCTTCAAAAGCTTTCTGATGTTAAAAGCACTGATGGAAAAACTACGTTACTTCACTTTGTGGTGGAAGAAGTAGTCCGTTCTGAGGGAAAACGTTGTGTTTTGAACCGAAATCGCAGCTTGAGTCGCAGTAGCAGTCAGAGCAGCAGCAACAGTAGTCTGTATTCTGAGAACTCGACATCAAGAGAGGATAGAGAAAAGGAATACATAATGATTGGTTTACCAGTGGTAGGAGGCCTAAGTGCTGAATTCTCTAATGTAAAGAAAGCAGCTGTAATAGACTACAATGCCTTTGCTGGCGTATGTTCAACTCTCACAGCCCATTCCACTGAAATCAAGCAGTTTGTGGCACAATTTGCCAACAGTGATGGAGGATTTTTGAGGAAGATGAAAAGTTTTCTCAAAGCATCTGATGAAGAATTAAGGGAAGTGAGAGAAGAGCAAACAAGGGTAATGGAACTGGTAAGGAGAACAACAGAATATTATCAACCACGATCTTCAAAGAACAAAGAGGCAAGCCCGGTTCAATTATTTGTTATAGTAAAAAATTTCCTGGGTATGGTCGATCAGGTCTGTGTTGATATTGCTAGAAATCTACAACGGAGGAAAACAACCACAGCAAGTTTGGGGTCATCAACAAAGTCACCACCATCAAGAATTCCAGTGAAATTTCCAAACTTGCCGCCAAATTTCATGTCAGACAAGTCCAGGAACTCTTCTTCTAGTGATTCAGAAGATGAGTTCTGA 2175 42.48 MLLLNCSIHEDLSFFAYKSPGNTKMRMGRPNNYSCLKLSTTKPQKAQDKTSTRIAQNKEKSNRVRFNPLCNFVAGLFFLLFQRYTVARRRRQKDGNDPRGGGEHVVHHTEFSRFNGNLKGLIVDENGLDVLYWKQLEGGSRKNSFRKEALHNLKDEEKRMSRNGDQRAKPEPIQEIPLLRGKSSTSYDEVQEEVENLNRFSAPPPLSQSFEISLEAAGGFTSSTKEASSVPKGVPNGSKLGESSSGYSKAGTGNGQVALKPLHWDKVNTNANHSMVWHKIDGGSFSFDGDLMEALFGFVATNRRSPQRNHNNPNGASSSQSAQIFILDSRKSQNTAIVLRSLAISRKEILNALIEGQDLNADTLEKLTKIAPTKEEESQILAFKGDPTRLADAESFLYHILKAVPSAFDRLSAMFFRLNYDSEILHLRECLQTLELGCKELRTRGLFLKLLEAILKAGNRMNAGTSRGNAQAFNLAALQKLSDVKSTDGKTTLLHFVVEEVVRSEGKRCVLNRNRSLSRSSSQSSSNSSLYSENSTSREDREKEYIMIGLPVVGGLSAEFSNVKKAAVIDYNAFAGVCSTLTAHSTEIKQFVAQFANSDGGFLRKMKSFLKASDEELREVREEQTRVMELVRRTTEYYQPRSSKNKEASPVQLFVIVKNFLGMVDQVCVDIARNLQRRKTTTASLGSSTKSPPSRIPVKFPNLPPNFMSDKSRNSSSSDSEDEF* 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9877666 9880443 + Vvi1g795 Vvi1g795 769995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g795 724 Pfam Formin Homology 2 Domain 256 664 IPR015425 -
Vvi1g795 724 MobiDBLite consensus disorder prediction 221 252 - -
Vvi1g795 724 SUPERFAMILY Formin homology 2 domain (FH2 domain) 262 679 - -
Vvi1g795 724 ProSiteProfiles Formin homology-2 (FH2) domain profile. 249 690 IPR015425 -
Vvi1g795 724 MobiDBLite consensus disorder prediction 679 695 - -
Vvi1g795 724 MobiDBLite consensus disorder prediction 238 252 - -
Vvi1g795 724 SMART it6_source 249 679 IPR015425 -
Vvi1g795 724 MobiDBLite consensus disorder prediction 679 724 - -
Vvi1g795 724 PANTHER FORMIN-LIKE PROTEIN 4 203 719 - -
Vvi1g795 724 PANTHER FORMIN-LIKE PROTEIN 4 37 202 - -
Vvi1g795 724 PANTHER FORMIN-RELATED 203 719 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vvi1g795 724 PANTHER FORMIN-RELATED 37 202 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vvi1g795 724 Gene3D Formin, FH2 domain 267 690 IPR042201 -
Vvi1g795 724 Coils Coil 603 623 - -
Vvi1g795 724 MobiDBLite consensus disorder prediction 514 534 - -
Vvi1g795 724 MobiDBLite consensus disorder prediction 514 537 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g795 Vvi14g1506 ECH
Vvi1g795 Vvi17g677 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g795 - - vvi:104879926 1160.98