Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g82 ATGAGCTCATTGGCATTCTCTCTTGGGTATTGCACTCCCATAAAGCTCAGAACATCGTCTGGTAGATTATTTGCAAGCAATGTCAACATAGTAGCTGAATCAAGAATCAAAATCTTAAGCCACCACCAAGAAAGCTCTTCTCCTCGACCACTGCAAATAAATGAAAACTCACCTTTGTTCGGGAGAAGAGAAGCAATTGGTTTTGGCTTCTGCTTCAGCATTCTTGATGTATTCTTGCAAGCACAACCCAGTGTAGCAGCCCAAACAGCTCCATGTGAACTAACAGTGGCTCCTTCTGGTCTAGCCTTCTGTGATAAAGTTGTGGGAACTGGCCCTGAGGCTGTCGAAGGACAGCTTATTAAGGCACATTATGTGGGGAAATTGGAAAGTGGGAAGGTCTTTGATAGCAGCTATGATCGTGGAAAGCCTCTTACATTTCGTATTGGTGTGGGTGAGGTCATTAGAGGCTGGGACCAGGGGATTCTAGGAGGTGATGGGGTTCCCCCCATGCTTGCTGGTGGAAAACGCACATTAAAGCTCCCCCCAGAGCTCGGATATGGCACGAGAGGTGCTGGCTGTAGAGGAGGTTCATGTATCATACCTCCAGATTCGGTTCTCCTGTTTGATGTAGAGTTCATCGGCAAGGCTTGA 651 47.16 MSSLAFSLGYCTPIKLRTSSGRLFASNVNIVAESRIKILSHHQESSSPRPLQINENSPLFGRREAIGFGFCFSILDVFLQAQPSVAAQTAPCELTVAPSGLAFCDKVVGTGPEAVEGQLIKAHYVGKLESGKVFDSSYDRGKPLTFRIGVGEVIRGWDQGILGGDGVPPMLAGGKRTLKLPPELGYGTRGAGCRGGSCIIPPDSVLLFDVEFIGKA* 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 793752 796574 + Vvi1g82 Vvi1g82 769282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g82 216 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 117 216 IPR001179 GO:0003755
Vvi1g82 216 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP13, CHLOROPLASTIC 37 216 - -
Vvi1g82 216 SUPERFAMILY FKBP-like 94 213 - -
Vvi1g82 216 Gene3D - 88 216 IPR046357 GO:0003755
Vvi1g82 216 PANTHER - 37 216 IPR044609 GO:0000413|GO:0003755|GO:0061077
Vvi1g82 216 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 112 213 IPR001179 GO:0003755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g82 K01802 - vvi:100262788 429.098