Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi1g830 | ATGGCTAAGAACGATGTGAAGCTTTTGGGTGCATGGCCAAGCCCATTTGTGATGCGAGCACGCATCGCCCTCAACATCAAATCCGTCGACTATGAGTTACTCGAAGAGAAACTGGGATCCAAGACCCAACTCCTCCTTCAATCTAACCCAGTTTATAAGAAAGTGCCCGTTCTCATCCATGAGCACAAACCCATATGCGAGTCCCTCATCATTGTCCAGTACATCGACGAGGCTTGGTCCTCTGGACCCTCCATCCTCCCTTCAGACCCTTATGACCGCGCTATTGCCCGCTTCTGGGGTGTCTACATTGACGATAAGTGGTTTCCGTTGCTGGGTGGGATCGGGAAGGCTCAAGGAGAGGAGGCGAAAAAGGCGGCAGTAGATCAAGTGCATGAAGGGCTTATGCTGTTAGAGGAGGCGTTCGGGAAGTGCAGCAAAGGGAAGGATTTCTTTAGCGGGGATCGAATTGGTTACCTTGATATCGCTTTAGGGTGCTTCTTGGGGTGGGTGAGGGTGTCGGAGAAGATGAATGGCGTGAAGCTGCTTGATGAAGCCAAGATGCCTGGTCTGGCTAGCTGGGTGGAGAAGTTCTGTGCGGACAGTGCTGTGAAGGATGTGATGCCGGATACCGATAAACTTTCGGAGTTTGCTAGGATGCTAATCCAAATTGTTAAGAATGAGATTAAGTCTAAAATCAAAATAAAACAAAAGTTTAAAAATATAAAAATAAAATATTACTTCCACCTTATAAATTTAGGGAGCTACGTTGATTCTCTATATGAGAGAGAAACTTGGACAGTAATAAGCTCTCCTCTCCTAAGAAAAGACCCTCACGTCCCTTTCTGTTGGTCTTTTCCTTTTGGAATCATAAAAACTGCTTTCAATCCTTTGATGATTCTGATCTACTCGCAATTAAACCGACTTAGCTCCATTCAACTGTATATTAGTTTCAGTCACAGTGAACTCGGTTGCTCTGCTTGA | 981 | 45.67 | MAKNDVKLLGAWPSPFVMRARIALNIKSVDYELLEEKLGSKTQLLLQSNPVYKKVPVLIHEHKPICESLIIVQYIDEAWSSGPSILPSDPYDRAIARFWGVYIDDKWFPLLGGIGKAQGEEAKKAAVDQVHEGLMLLEEAFGKCSKGKDFFSGDRIGYLDIALGCFLGWVRVSEKMNGVKLLDEAKMPGLASWVEKFCADSAVKDVMPDTDKLSEFARMLIQIVKNEIKSKIKIKQKFKNIKIKYYFHLINLGSYVDSLYERETWTVISSPLLRKDPHVPFCWSFPFGIIKTAFNPLMILIYSQLNRLSSIQLYISFSHSELGCSA* | 327 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 10300522 | 10305820 | + | Vvi1g830 | Vvi1g830 | 770030 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi1g830 | 326 | CDD | GST_C_Tau | 90 | 218 | IPR045074 | GO:0004364|GO:0006749 | |
Vvi1g830 | 326 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 4 | 83 | IPR004045 | - | |
Vvi1g830 | 326 | Pfam | Glutathione S-transferase, N-terminal domain | 6 | 77 | IPR004045 | - | |
Vvi1g830 | 326 | SFLD | Main.3: Omega- and Tau-like | 2 | 226 | IPR045073 | - | |
Vvi1g830 | 326 | Gene3D | - | 86 | 229 | - | - | |
Vvi1g830 | 326 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 89 | 216 | IPR010987 | - | |
Vvi1g830 | 326 | CDD | GST_N_Tau | 6 | 79 | - | - | |
Vvi1g830 | 326 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 4 | 219 | IPR045073 | - | |
Vvi1g830 | 326 | PANTHER | GLUTATHIONE S-TRANSFERASE U17 | 4 | 219 | - | - | |
Vvi1g830 | 326 | Gene3D | Glutaredoxin | 1 | 85 | - | - | |
Vvi1g830 | 326 | SFLD | Main (cytGST) | 2 | 226 | - | - | |
Vvi1g830 | 326 | Pfam | Glutathione S-transferase, C-terminal domain | 121 | 195 | - | - | |
Vvi1g830 | 326 | SUPERFAMILY | Thioredoxin-like | 5 | 108 | IPR036249 | - | |
Vvi1g830 | 326 | SUPERFAMILY | GST C-terminal domain-like | 77 | 223 | IPR036282 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi1g830 | K00799 | - | vvi:100250199 | 442.58 |