Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g830 ATGGCTAAGAACGATGTGAAGCTTTTGGGTGCATGGCCAAGCCCATTTGTGATGCGAGCACGCATCGCCCTCAACATCAAATCCGTCGACTATGAGTTACTCGAAGAGAAACTGGGATCCAAGACCCAACTCCTCCTTCAATCTAACCCAGTTTATAAGAAAGTGCCCGTTCTCATCCATGAGCACAAACCCATATGCGAGTCCCTCATCATTGTCCAGTACATCGACGAGGCTTGGTCCTCTGGACCCTCCATCCTCCCTTCAGACCCTTATGACCGCGCTATTGCCCGCTTCTGGGGTGTCTACATTGACGATAAGTGGTTTCCGTTGCTGGGTGGGATCGGGAAGGCTCAAGGAGAGGAGGCGAAAAAGGCGGCAGTAGATCAAGTGCATGAAGGGCTTATGCTGTTAGAGGAGGCGTTCGGGAAGTGCAGCAAAGGGAAGGATTTCTTTAGCGGGGATCGAATTGGTTACCTTGATATCGCTTTAGGGTGCTTCTTGGGGTGGGTGAGGGTGTCGGAGAAGATGAATGGCGTGAAGCTGCTTGATGAAGCCAAGATGCCTGGTCTGGCTAGCTGGGTGGAGAAGTTCTGTGCGGACAGTGCTGTGAAGGATGTGATGCCGGATACCGATAAACTTTCGGAGTTTGCTAGGATGCTAATCCAAATTGTTAAGAATGAGATTAAGTCTAAAATCAAAATAAAACAAAAGTTTAAAAATATAAAAATAAAATATTACTTCCACCTTATAAATTTAGGGAGCTACGTTGATTCTCTATATGAGAGAGAAACTTGGACAGTAATAAGCTCTCCTCTCCTAAGAAAAGACCCTCACGTCCCTTTCTGTTGGTCTTTTCCTTTTGGAATCATAAAAACTGCTTTCAATCCTTTGATGATTCTGATCTACTCGCAATTAAACCGACTTAGCTCCATTCAACTGTATATTAGTTTCAGTCACAGTGAACTCGGTTGCTCTGCTTGA 981 45.67 MAKNDVKLLGAWPSPFVMRARIALNIKSVDYELLEEKLGSKTQLLLQSNPVYKKVPVLIHEHKPICESLIIVQYIDEAWSSGPSILPSDPYDRAIARFWGVYIDDKWFPLLGGIGKAQGEEAKKAAVDQVHEGLMLLEEAFGKCSKGKDFFSGDRIGYLDIALGCFLGWVRVSEKMNGVKLLDEAKMPGLASWVEKFCADSAVKDVMPDTDKLSEFARMLIQIVKNEIKSKIKIKQKFKNIKIKYYFHLINLGSYVDSLYERETWTVISSPLLRKDPHVPFCWSFPFGIIKTAFNPLMILIYSQLNRLSSIQLYISFSHSELGCSA* 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10300522 10305820 + Vvi1g830 Vvi1g830 770030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g830 326 CDD GST_C_Tau 90 218 IPR045074 GO:0004364|GO:0006749
Vvi1g830 326 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Vvi1g830 326 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Vvi1g830 326 SFLD Main.3: Omega- and Tau-like 2 226 IPR045073 -
Vvi1g830 326 Gene3D - 86 229 - -
Vvi1g830 326 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 216 IPR010987 -
Vvi1g830 326 CDD GST_N_Tau 6 79 - -
Vvi1g830 326 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 219 IPR045073 -
Vvi1g830 326 PANTHER GLUTATHIONE S-TRANSFERASE U17 4 219 - -
Vvi1g830 326 Gene3D Glutaredoxin 1 85 - -
Vvi1g830 326 SFLD Main (cytGST) 2 226 - -
Vvi1g830 326 Pfam Glutathione S-transferase, C-terminal domain 121 195 - -
Vvi1g830 326 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
Vvi1g830 326 SUPERFAMILY GST C-terminal domain-like 77 223 IPR036282 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g830 K00799 - vvi:100250199 442.58