Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g831 ATGGGTATGAAAGAGTTTGGAGAGAGAGAAAAGGTGGTAATGTGGAATGGGTTTGATGGGTGCATGCATGGGGGCATGAAGCGAGGGCTTAGGTGGAAATGGACTCAGACAGCGGCGGCCATGGCTACGAGCGACGTGAAGCTATTGGGTGCGTGGCCAAGCCCATTCGCCTTGCGAGTCCACATCGCCCTTAACATCAAATCCATTGACTACGAGTGTCTCGAAGAGAACCTGCTAGCCAAGAGCCAGCTCCTCCTCCAATCCAACCCAGTACACAAGAAAGTCCCAGTTCTCATCCACCATGACAAACCCATATGCGAGTCCCTCGCCATTGTTCAGTACATCGACGAGGCTTGGTCCTCCGCTCCCTCCATCCTCCCCTCAGACCCTTACGACCGCGCTGTTGCCCGCTTCTGGGCTGCTTATATTGACGACAAGTGGTTTCCATGGCTGAATGGGGTAGCGAATGCTCAAGGAGCGGAGGCAAAAAAGGCGGCGTTGGATCAAGTACGTGAAGGGTTAGTGGTACTGGAGGAGGCGTTTGGGAAGTGCAGCAAAGGTAAGGATTTCTTCAGCGGGGATCGAATTGGATACGTTGATATTGCTCTAGGGTGCTTCTTGGGGTGGGTGTATGTGGCGGAGAAGAGGAACGACGTAAAGCTGCTTGTTGAAGACAAGATGCCTGGTCTGGCTGCATGGGCAAACAAGTTTTGTGAGGATGGTACTGTGAAGGATGTGATGCCAGACAAAGATGAGCTATTGGAGTTTGCTAACATGATCCTCGAAGCCAGGGCCAAACTCAATGCCTCTTCTAATAATTAA 822 51.82 MGMKEFGEREKVVMWNGFDGCMHGGMKRGLRWKWTQTAAAMATSDVKLLGAWPSPFALRVHIALNIKSIDYECLEENLLAKSQLLLQSNPVHKKVPVLIHHDKPICESLAIVQYIDEAWSSAPSILPSDPYDRAVARFWAAYIDDKWFPWLNGVANAQGAEAKKAALDQVREGLVVLEEAFGKCSKGKDFFSGDRIGYVDIALGCFLGWVYVAEKRNDVKLLVEDKMPGLAAWANKFCEDGTVKDVMPDKDELLEFANMILEARAKLNASSNN* 274
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10323461 10348110 + Vvi1g831 Vvi1g831 770031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g831 273 CDD GST_C_Tau 130 258 IPR045074 GO:0004364|GO:0006749
Vvi1g831 273 Pfam Glutathione S-transferase, N-terminal domain 45 117 IPR004045 -
Vvi1g831 273 SFLD Main.3: Omega- and Tau-like 42 263 IPR045073 -
Vvi1g831 273 SFLD Glutathione Transferase (cytosolic) 42 263 IPR040079 -
Vvi1g831 273 Gene3D - 126 268 - -
Vvi1g831 273 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 44 258 IPR045073 -
Vvi1g831 273 PANTHER GLUTATHIONE S-TRANSFERASE U17 44 258 - -
Vvi1g831 273 Gene3D Glutaredoxin 31 125 - -
Vvi1g831 273 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 44 123 IPR004045 -
Vvi1g831 273 SUPERFAMILY Thioredoxin-like 45 148 IPR036249 -
Vvi1g831 273 CDD GST_N_Tau 46 119 - -
Vvi1g831 273 Pfam Glutathione S-transferase, C-terminal domain 138 239 IPR004046 -
Vvi1g831 273 SUPERFAMILY GST C-terminal domain-like 117 261 IPR036282 -
Vvi1g831 273 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 129 267 IPR010987 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g831 K00799 - vvi:100267378 470.7