Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g834 ATGGATTCTCTCCTTCCACCCGTATTCACGTACGAAGAGCTAGATACTTCAACCAACCGCTTCGACTCCAAGCGCAAAATCGGCGATGGTGGGTTCGCCTTCTCCACGAAATCCTTCTGCAACGAGATCTTGATACTGTCGTCAATTGATCACCCCAACCTAGTGAAGCTCCACGGCTACTGCAGCGACCCAAGAGGGCTTCTTCTCGTCTACGATTACGTCCCAAACGGGACACTCGCCGACCACCTCCATGGCCCAAAGAGCTTATACCGCAAAGCCTCGTTAACATGGCAAGTCAGAATTGATATAGCGTTACAAACAGCCATGGCCATCGAGTACCTCCATTTCTCGGTCGAACCAGCCATTGCACTCCGGGCTACTTGGACCCAGACTACCACCGGTCCTTCCGCTTGA 414 52.66 MDSLLPPVFTYEELDTSTNRFDSKRKIGDGGFAFSTKSFCNEILILSSIDHPNLVKLHGYCSDPRGLLLVYDYVPNGTLADHLHGPKSLYRKASLTWQVRIDIALQTAMAIEYLHFSVEPAIALRATWTQTTTGPSA* 138
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10393876 10395532 - Vvi1g834 Vvi1g834 770034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g834 137 ProSiteProfiles Protein kinase domain profile. 1 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi1g834 137 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.5 35 125 - -
Vvi1g834 137 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.5 3 33 - -
Vvi1g834 137 Gene3D Transferase(Phosphotransferase) domain 1 2 122 - -
Vvi1g834 137 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 35 125 IPR045274 GO:0007166
Vvi1g834 137 Pfam Protein tyrosine and serine/threonine kinase 36 115 IPR001245 GO:0004672|GO:0006468
Vvi1g834 137 SUPERFAMILY Protein kinase-like (PK-like) 5 115 IPR011009 -
Vvi1g834 137 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 3 33 IPR045274 GO:0007166
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76523 PF07714 PK_Tyr_Ser-Thr 5.30E-13 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g834 - - vvi:100241694 233.032