Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g900 ATGGATATCTCTGACATTGCGAAGAAGCTAGGTCTATCCGATTCCAAACACATCATCCGAAAAGCCGCCGAGCTCCGCCGCCTCTGCGACATCCAGTTCGATTCTTCTGTCATCGGAGTTGGGGAGATCTGCAAGGCCATAATCTGCTTAGAAATCGCCGCTTCAAGATGGGAAGAAGTCATTTTTGATCGCCCGAGCGCGATAAAATTGAGTGGCATGTCAGAGAAGGCATATAATCGATCGTTCAATGCAATGCAGAATGGTCTTGGTGTCAAGACAAAGCTGGATATTAGAGAATTGGGGATTCGGTTTGGATGTGTTAGGCTCATTCCTTTCGTGCAGAAGGGTCTGTCACTCTATAAGGATCGATTTCTTGCATCATTGCCAGCTTCTCGGCGGACAAGTGCTGACTTCACTCGGCCAGTATTTACTGCTGTAGCATTCTACTTGTGTGCAAAAAGGCACAAGCTGAAGATAGACAAGCTTAAGTTGATTGAGCTTTGTGGGACATCCGAATCTGAATTTTCCTCTGTTTCTACATCTATGAAGGACCTATGTCATGATGTCTTTGGGATCTCCAAGGAGAAAAAAGACCCCAAGGATGTGAAAGGGAACCGAGAACTGTTGGATACATTACCTGGGAAAAGGAAACTTGATGATGGTGGTTATTCATCTGATGATGCACTGGAGCTTTCAAGTTACAAGCGGCGTAAACAAAAGGATAAACTTGCTTATGAGGAATGGAAATCTTCTGTAACTGCAGCTAATAAGCAAAGCAAGGCCAAAGTTCCTAGTAGGCAAACTAAGCAAACTAAACTCGACTTTCAGAAGGAAGTTCCTGAGACCCAGAAGTTGGAGGCTATGTAA 867 44.52 MDISDIAKKLGLSDSKHIIRKAAELRRLCDIQFDSSVIGVGEICKAIICLEIAASRWEEVIFDRPSAIKLSGMSEKAYNRSFNAMQNGLGVKTKLDIRELGIRFGCVRLIPFVQKGLSLYKDRFLASLPASRRTSADFTRPVFTAVAFYLCAKRHKLKIDKLKLIELCGTSESEFSSVSTSMKDLCHDVFGISKEKKDPKDVKGNRELLDTLPGKRKLDDGGYSSDDALELSSYKRRKQKDKLAYEEWKSSVTAANKQSKAKVPSRQTKQTKLDFQKEVPETQKLEAM* 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11767828 11770802 + Vvi1g900 Vvi1g900 770100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g900 288 MobiDBLite consensus disorder prediction 255 270 - -
Vvi1g900 288 Gene3D - 93 189 - -
Vvi1g900 288 Pfam Origin recognition complex subunit 6 (ORC6) 3 93 IPR008721 GO:0003677|GO:0005664|GO:0006260
Vvi1g900 288 MobiDBLite consensus disorder prediction 271 288 - -
Vvi1g900 288 MobiDBLite consensus disorder prediction 255 288 - -
Vvi1g900 288 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 1 283 IPR020529 GO:0005664|GO:0006260
Vvi1g900 288 CDD Orc6_mid 94 189 - -
Vvi1g900 288 PANTHER BNAC05G50940D PROTEIN 1 283 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g900 K02608 - vvi:100248173 543.502