Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g92 ATGAGCAGCTTGGGCTTGAAGAGCTTGCTATCGGCAGCGGTGAAGGGAGGCGTGACGGAGGCACGGGCGAGAATATTCGGTCACGTACTTAACCCAACTGGACAGAGATCTCCCCACAAGATTCTCCGCAAGAAGCTTATTGGTGAGAAAGTCGCTCAATGGTACCCTTATGACATCAAGAAAGACGACCCTCTCGTCATGGCTCGCCAGGAACAAGAGCGTTTGTCCAAGCTTGAAATGTTGAAGCGTCGTGGGAAGGGACCTCCCAAGAAAGGGCAGGGGAAGCGTGCTGCTAAGCGTAACAAGTAG 309 53.07 MSSLGLKSLLSAAVKGGVTEARARIFGHVLNPTGQRSPHKILRKKLIGEKVAQWYPYDIKKDDPLVMARQEQERLSKLEMLKRRGKGPPKKGQGKRAAKRNK* 103
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 958550 959737 + Vvi1g92 Vvi1g92 769292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g92 102 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN S33 1 102 IPR013219 -
Vvi1g92 102 Pfam Mitochondrial ribosomal subunit S27 18 91 IPR013219 -
Vvi1g92 102 MobiDBLite consensus disorder prediction 87 102 - -
Vvi1g92 102 PANTHER BNAANNG05200D PROTEIN 1 102 - -
Vvi1g92 102 MobiDBLite consensus disorder prediction 77 102 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g92 K17411 - vvi:100264641 158.688