Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g934 ATGCATGACTGGCTTGTCAAATACTTGTCCAAGTCAAGAACTGTTGCGGTCCCCATGCCTTTCACTACTTATACCTACATTGCAGATCCTGCCAATGTAGAACATGTCCTCAAGACCAACTTTGCCAATTATCCCAAGGGTGAAGTGTATCATTCATACATGGAAGTACTGCTTGGAGATGGGATTTTCAATGTAGATGGTGAGCTCTGGAGGAGGCAGAGGAAGACTGCAAGCTTCGAGTTTGCATCCAAGAACTTGAGGGATTTCAGCACTATTGTATTCAGAGAGTATAGCCTCAAGCTCTCTGCTATTCTTAGTGAAGCCTCTTTCCACAACCGAGAAGTAGACATGCAGGATTTGCTTATGAGGATGACGTTGGACTCCATATGTAAGGTGGGATTTGGTGTAGAAATTGGGACTTTGGCTCCTAATCTACCAGAAAACTGCTTTGCTCGTGCTTTTGACACTGCAAACATCATTGTCACACTTCGCTTCATCGACCCACTATGGAAAATAAAGAAATTTCTTAATGTAGGTTCAGAATCTCTGCTTGATAAGAGCATTAAAGTCATCGATGATTTCACATACTCTGTTATTCGTACAAGGAAAGCAGAGATAGATCAAGCTCGTAAATCGCATGACGATAAGATAAAGCATGATATATTATCAAGATTCATCGAGTTAGGTGAAAACCCAGAAAGCAATTTAACCGACAAAAGCCTCCGAGATGTAGTGCTCAACTTTGTGATAGCTGGCCGTGATACAACAGCAACAACTCTCTCATGGGCTGTGTACATGATGATGGCTCATGCCCATGTAGCTGACAAGCTTTACTCAGAGCTCAAAACTTTTGAAGAAGATCGAGCAAAAGAAGATAAAATTTCACTGCTCCATTATGACATAGAGGACTCCAAGTCATTCAATCAAAGAGTGACCCAATTTGCAAGACTCTTGACCTATGATTCATTGGGGAGATTACATTACTTACATGCAGTGATCACAGAAACACTACGCTTGTACCCTGCAGTCCCTCAGGACCCCAAGGGCATATTGGAGGACGATGTTTTGCCAGATGGAACCAGAGTAAAAGCAGGAGGCATGGTGACTTACGTCCCCTACTCAATGGGTAGAATGGAGTACAACTGGGGTCCTGATGCAACGTTATTCAAGCCTGAGAGATGGCTTAAAGAGGGGTTCTTCCAAAATGCATCTCCTTTCAAGTTCACTGCATTCCAGGCTGGTCCAAGGATATGCCTTGGGAAGGACTCGGCATATCTCCAAATGAAGATGGCAATAGCTTTATTGTGTAGGTTTTTCAAATTCAATTTAGTACAAGGGCACATAGTGAAGTACAGGATGATGACAATTTTATCTATGGCCAATGGATTAAAGGTTACCGTCTCCAGAAGATCTTAA 1416 42.51 MHDWLVKYLSKSRTVAVPMPFTTYTYIADPANVEHVLKTNFANYPKGEVYHSYMEVLLGDGIFNVDGELWRRQRKTASFEFASKNLRDFSTIVFREYSLKLSAILSEASFHNREVDMQDLLMRMTLDSICKVGFGVEIGTLAPNLPENCFARAFDTANIIVTLRFIDPLWKIKKFLNVGSESLLDKSIKVIDDFTYSVIRTRKAEIDQARKSHDDKIKHDILSRFIELGENPESNLTDKSLRDVVLNFVIAGRDTTATTLSWAVYMMMAHAHVADKLYSELKTFEEDRAKEDKISLLHYDIEDSKSFNQRVTQFARLLTYDSLGRLHYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTRVKAGGMVTYVPYSMGRMEYNWGPDATLFKPERWLKEGFFQNASPFKFTAFQAGPRICLGKDSAYLQMKMAIALLCRFFKFNLVQGHIVKYRMMTILSMANGLKVTVSRRS* 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12438064 12440478 - Vvi1g934 Vvi1g934 770134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g934 471 Gene3D Cytochrome P450 1 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g934 471 PRINTS E-class P450 group I signature 240 257 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g934 471 PRINTS E-class P450 group I signature 260 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g934 471 PRINTS E-class P450 group I signature 330 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g934 471 PRINTS E-class P450 group I signature 408 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g934 471 PRINTS E-class P450 group I signature 418 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g934 471 PRINTS P450 superfamily signature 251 268 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g934 471 PRINTS P450 superfamily signature 331 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g934 471 PRINTS P450 superfamily signature 409 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g934 471 PRINTS P450 superfamily signature 418 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g934 471 PANTHER CYTOCHROME P450 1 470 - -
Vvi1g934 471 PANTHER CYTOCHROME P450 704B1 1 470 - -
Vvi1g934 471 Pfam Cytochrome P450 19 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g934 471 SUPERFAMILY Cytochrome P450 2 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g934 K20495 - vvi:100258457 937.947