Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi1g934 | ATGCATGACTGGCTTGTCAAATACTTGTCCAAGTCAAGAACTGTTGCGGTCCCCATGCCTTTCACTACTTATACCTACATTGCAGATCCTGCCAATGTAGAACATGTCCTCAAGACCAACTTTGCCAATTATCCCAAGGGTGAAGTGTATCATTCATACATGGAAGTACTGCTTGGAGATGGGATTTTCAATGTAGATGGTGAGCTCTGGAGGAGGCAGAGGAAGACTGCAAGCTTCGAGTTTGCATCCAAGAACTTGAGGGATTTCAGCACTATTGTATTCAGAGAGTATAGCCTCAAGCTCTCTGCTATTCTTAGTGAAGCCTCTTTCCACAACCGAGAAGTAGACATGCAGGATTTGCTTATGAGGATGACGTTGGACTCCATATGTAAGGTGGGATTTGGTGTAGAAATTGGGACTTTGGCTCCTAATCTACCAGAAAACTGCTTTGCTCGTGCTTTTGACACTGCAAACATCATTGTCACACTTCGCTTCATCGACCCACTATGGAAAATAAAGAAATTTCTTAATGTAGGTTCAGAATCTCTGCTTGATAAGAGCATTAAAGTCATCGATGATTTCACATACTCTGTTATTCGTACAAGGAAAGCAGAGATAGATCAAGCTCGTAAATCGCATGACGATAAGATAAAGCATGATATATTATCAAGATTCATCGAGTTAGGTGAAAACCCAGAAAGCAATTTAACCGACAAAAGCCTCCGAGATGTAGTGCTCAACTTTGTGATAGCTGGCCGTGATACAACAGCAACAACTCTCTCATGGGCTGTGTACATGATGATGGCTCATGCCCATGTAGCTGACAAGCTTTACTCAGAGCTCAAAACTTTTGAAGAAGATCGAGCAAAAGAAGATAAAATTTCACTGCTCCATTATGACATAGAGGACTCCAAGTCATTCAATCAAAGAGTGACCCAATTTGCAAGACTCTTGACCTATGATTCATTGGGGAGATTACATTACTTACATGCAGTGATCACAGAAACACTACGCTTGTACCCTGCAGTCCCTCAGGACCCCAAGGGCATATTGGAGGACGATGTTTTGCCAGATGGAACCAGAGTAAAAGCAGGAGGCATGGTGACTTACGTCCCCTACTCAATGGGTAGAATGGAGTACAACTGGGGTCCTGATGCAACGTTATTCAAGCCTGAGAGATGGCTTAAAGAGGGGTTCTTCCAAAATGCATCTCCTTTCAAGTTCACTGCATTCCAGGCTGGTCCAAGGATATGCCTTGGGAAGGACTCGGCATATCTCCAAATGAAGATGGCAATAGCTTTATTGTGTAGGTTTTTCAAATTCAATTTAGTACAAGGGCACATAGTGAAGTACAGGATGATGACAATTTTATCTATGGCCAATGGATTAAAGGTTACCGTCTCCAGAAGATCTTAA | 1416 | 42.51 | MHDWLVKYLSKSRTVAVPMPFTTYTYIADPANVEHVLKTNFANYPKGEVYHSYMEVLLGDGIFNVDGELWRRQRKTASFEFASKNLRDFSTIVFREYSLKLSAILSEASFHNREVDMQDLLMRMTLDSICKVGFGVEIGTLAPNLPENCFARAFDTANIIVTLRFIDPLWKIKKFLNVGSESLLDKSIKVIDDFTYSVIRTRKAEIDQARKSHDDKIKHDILSRFIELGENPESNLTDKSLRDVVLNFVIAGRDTTATTLSWAVYMMMAHAHVADKLYSELKTFEEDRAKEDKISLLHYDIEDSKSFNQRVTQFARLLTYDSLGRLHYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTRVKAGGMVTYVPYSMGRMEYNWGPDATLFKPERWLKEGFFQNASPFKFTAFQAGPRICLGKDSAYLQMKMAIALLCRFFKFNLVQGHIVKYRMMTILSMANGLKVTVSRRS* | 472 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 12438064 | 12440478 | - | Vvi1g934 | Vvi1g934 | 770134 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi1g934 | 471 | Gene3D | Cytochrome P450 | 1 | 471 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi1g934 | 471 | PRINTS | E-class P450 group I signature | 240 | 257 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi1g934 | 471 | PRINTS | E-class P450 group I signature | 260 | 286 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi1g934 | 471 | PRINTS | E-class P450 group I signature | 330 | 348 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi1g934 | 471 | PRINTS | E-class P450 group I signature | 408 | 418 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi1g934 | 471 | PRINTS | E-class P450 group I signature | 418 | 441 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi1g934 | 471 | PRINTS | P450 superfamily signature | 251 | 268 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi1g934 | 471 | PRINTS | P450 superfamily signature | 331 | 342 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi1g934 | 471 | PRINTS | P450 superfamily signature | 409 | 418 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi1g934 | 471 | PRINTS | P450 superfamily signature | 418 | 429 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi1g934 | 471 | PANTHER | CYTOCHROME P450 | 1 | 470 | - | - | |
Vvi1g934 | 471 | PANTHER | CYTOCHROME P450 704B1 | 1 | 470 | - | - | |
Vvi1g934 | 471 | Pfam | Cytochrome P450 | 19 | 461 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi1g934 | 471 | SUPERFAMILY | Cytochrome P450 | 2 | 470 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi1g934 | K20495 | - | vvi:100258457 | 937.947 |