Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g967 ATGGCCGTGATAAAATCTGGGAGTGGGGCTATGAGCTTCACCAAGGCTCTGGCTGTTTCTTTGATATCTCTGCCTTTTCTCTTCACACTCTTCGTTCTCTACCGGAACCCACCTTCTGATCCAACCCCAGATTTCAGAGAAGCTAGGGTTTTGGACGTGCCACCCAGGATTGTTAATGCGTTGAAACTGGGTACGAAAACAGTATTCAATGATAATTCCTCTCAACCTGCTGACATGTCTAAAGACAGTCTGCTTGGTGGGCTTCTTGCTGCTGGATTTGGCGAAAAATCTTGCTTAAGCAGGTACCAGTCTGCCTTGTATCGAAAAATTTCACCTTATAAGCCTTCTTCCTATCTTCTTTCCAGATTGCGGAAGTATGAAGACCTCCATAAACATTGTGGACCCCATACCAAATCCTACAGGAAAACCATAAAACTACTCAAGTCTGGCCACAGTGTTGGCCCAACAGATTGTAACTATGTTGTGTGGATATCTTACAGTGGCTTAGGGAACAGGATCCTCACCCTGGCTTCTGCATTCCTTTATGCTCTTCTCACAAACCGTGTCCTGCTTGTTGACCGGGGAAAAGACATGGCTGATCTATTCTGTGAGCCATTTCCTGAAAAATCATGGTTACTGCCCCTGGACTTTCCCCTACTGCCTAAATTCAACAGCATTAACAAAGAATCTCCTCATTGTTTTGGGAAGATGCTGAAGAATAATATCATAAATTCCTCAACAGAACAACCGCCACCATTTTTATATATCTACCTGAGTCACGATTATGGTGATCATGATAAGCTTTTCTTCTGTGATCAGGAACAAACCCTTCTTGGGAAAGTCCCTTGGTTGATCATGAAGACTAATAACTACTTTGTCCCATCTCTCTTCTTGATGCCTTCTTTTGAACAAGAACTAAGCAAATTATTCCCAGAAAAGGAAACTACTTTCCATCACTTGGGTCGGTATCTTTTCCACCCTTCAAATCAAGTATGGGGACTGATCACAAGGAACATGTATTGGGAGCAGTCAGCCATGAGTGGGGAGGTGGTCAGCGTATACCAGCCAAGCCATGAGGAAGTCCAACAGAGTGAGAAGCAGGGGCACAACAGGAAGGCATGGGCAGAAATGTATCTCCTAAGTACGACTGAGGCATTGATAACCAGCGCATGGTCAACCTTTGGCTATGTGGCTCAGGGTCTTGGAGGTGTGACGCCTTGGATTCTGTACAAGCCTCAAAATCGGACAGCTCCTGATCCACCTTGTGGCAGGGCAATGTCAATGGAGCCATGCTTTCATGCCCCTCCCTTCTATGACTGTAAGGCGAAGACAGGAGTCGATACTGGTGCGCTTGTTCCTCATGTAAGACACTGTGAAGACATGAGCTGGGGCCTCAAGCTGGTTGGTAGACATAGAGAGTTGTAG 1425 45.68 MAVIKSGSGAMSFTKALAVSLISLPFLFTLFVLYRNPPSDPTPDFREARVLDVPPRIVNALKLGTKTVFNDNSSQPADMSKDSLLGGLLAAGFGEKSCLSRYQSALYRKISPYKPSSYLLSRLRKYEDLHKHCGPHTKSYRKTIKLLKSGHSVGPTDCNYVVWISYSGLGNRILTLASAFLYALLTNRVLLVDRGKDMADLFCEPFPEKSWLLPLDFPLLPKFNSINKESPHCFGKMLKNNIINSSTEQPPPFLYIYLSHDYGDHDKLFFCDQEQTLLGKVPWLIMKTNNYFVPSLFLMPSFEQELSKLFPEKETTFHHLGRYLFHPSNQVWGLITRNMYWEQSAMSGEVVSVYQPSHEEVQQSEKQGHNRKAWAEMYLLSTTEALITSAWSTFGYVAQGLGGVTPWILYKPQNRTAPDPPCGRAMSMEPCFHAPPFYDCKAKTGVDTGALVPHVRHCEDMSWGLKLVGRHREL* 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 14246015 14249230 + Vvi1g967 Vvi1g967 770167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g967 474 Pfam Xyloglucan fucosyltransferase 65 337 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vvi1g967 474 Pfam Xyloglucan fucosyltransferase 337 441 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vvi1g967 474 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE 337 472 - -
Vvi1g967 474 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE 9 337 - -
Vvi1g967 474 PANTHER FUCOSYLTRANSFERASE 2-RELATED 9 337 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vvi1g967 474 PANTHER FUCOSYLTRANSFERASE 2-RELATED 337 472 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vvi1g967 474 Gene3D - 156 207 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g967 Vvi17g575 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g967 K13681 - vvi:100243671 670.233