Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g97 ATGATTTACCATATCTTATCACAATATCGCCTTCATTCTGGTGTGGAGGGGAAGGCAGGCTTGGAGAGAAACCATGGAATCTCCTCATTTTTGTCTTTGTGCCATCATCCAAGCCATGTGCCCCCACCAACCATAGAAAATAAGGCGTTTATCTTGTCTCAATCTCTAGTATCTAGCCAACTAGAAATTCACAACAATTCAAAAAGTCTCATCTTCATTGCTCAATTATTCAGAGGTAATATCTCTTACAGAAGAAACATCACATTCCTGAGTCATAAAAAGGCTTCTAGCCGCAGTGGGTCTTGCATTCATCACTTGTCTTCATTACCCATTAGAGAAGCAGTGATGGGTTCAATGGGAGAAGTGGGTGATGAGATCCAACCAAGAGGCTATTGGAGATGGAGCAAACAAGATTTCTTACCAGAGGAGTCATTCAAAAACTGGGCCAGCTACCGCTCAGCGCTTTCCCAAACATGTTTTCGGTTCAAGGACCGCCTCACAAGCAGATCTGAAGATGCCATTGAGATTGGGGAGATGCGTAAACAAAGTGAGAATGACATGAAACGTTGCCTAACGTGGTGGGATCTTACCTGGTTCGGGTTTGGCTCAGTCATTGGAGCTGGTATCTTTGTGCTTACTGGCCAAGAAGCTCATGACCATGCTGGACCAGCCATAGTCCTGTCCTATGTGGCTTCAGGTGTTTCAGCACTGCTCTCTGTTTTCTGCTACACGGAATTTGCAGTAGAAATCCCAGTAGCTGGTGGCTCATTCGCGTACCTGAGAATAGAATTGGGAGACTTTGCAGCATTCATAACAGCTGGTAATATACTTCTTGAAAGTATTGTTGGAAGTGCAGGAGTTGCCAGGGCTTGGACTTCTTACTTCACAACCCTTCTGAACCGTCCCACCAACTCATTGAGAATCCACACAAATCTCACAAAGGGATACAACCTGCTGGACCCAATTGCTGTTGCAGTTCTGGCTATTGCTGCAACGCTTGCTATGATCAGCACCAGGAAGACTTCAGTCTTCAATTGGATCGCATCTGCTATAAATACTGTAGTGATTTTGTTTGTTATCATTGCAGGGTTTGCTAATGCTGACCCTTCAAATTTGACACCCTTTTTGCCTTACGGGGCTAAAGGGATCTTCCAAGCAGCTGCAATTGTATACTTTGCTTATGGAGGATTTGACAATATCGCCACCATGGCTGAAGAAACAAAAAACCCATCAAGAGATATACCATTAGGATTGCTCGGATCAATGTCAATCATCACTGTCATATATTGCTTAATGGCGCTTGCGCTCAGTATGATGCAGGACTACAGGGACATTGACAGACAAGCAGCTTACTCTCTTGCATTTCAAAGTGTGGGTATGAAGTGGGCCAAGTACCTGGTAGCTCTGGGTGCCCTGAAGGGGATGACCACTGTTCTTCTGGTTGGGGCACTTGGACAGGCACGATATGTTACTCATATCGCACGAGCCCACATGATCCCTCCATGGTTTGCTCTGGTGCACCCAAAAACAGGAACCCCTATAAATGCTACACTCTTGATTGTCATTTCAAGTGCCCTCATCGCTTTCTTTTCAAGCTTGGATGTCTTGGCAAGCTTGTTATCTGTGAGCACACTCTTCGTCTTCATGATGATGGCAGTAGCACTTCTTGTGAGGAGATACTATGTGACAGGGGTTACTCCACGTATCAACCTCTTGAAGCTAGTAATTTTCTTGCTGATAATTGTTGCTTCCTCCATGGGGACTTCAGCTTACTGGGGATTGAATCCCAATGGTTGGGTTGGTTATGCAATCACCATTCCTCTCTGGGTCCTGGGGACTGCAGGGATCTCAGTGTTTCTGCCCCAGCAGAGGACGCCAAAGGTTTGGGGGGTTCCACTTGTTCCATGGCTTCCATCCTTGTCGATTGCAACAAATCTCTTTCTCATGGGATCTCTGGAGTCTAAGGCTTTCATAAGATTCGGTGTCTGCACCGTTTTAATGCTGGTTTACTATGTTTTCTTTGGTCTCCATGCAACTTATGATGTGGCCCATCAACAACAAAAGCCAGAATCCTTGAAACTGAAATTTAACATTTCAGCCTCTTTTTGA 2109 45.14 MIYHILSQYRLHSGVEGKAGLERNHGISSFLSLCHHPSHVPPPTIENKAFILSQSLVSSQLEIHNNSKSLIFIAQLFRGNISYRRNITFLSHKKASSRSGSCIHHLSSLPIREAVMGSMGEVGDEIQPRGYWRWSKQDFLPEESFKNWASYRSALSQTCFRFKDRLTSRSEDAIEIGEMRKQSENDMKRCLTWWDLTWFGFGSVIGAGIFVLTGQEAHDHAGPAIVLSYVASGVSALLSVFCYTEFAVEIPVAGGSFAYLRIELGDFAAFITAGNILLESIVGSAGVARAWTSYFTTLLNRPTNSLRIHTNLTKGYNLLDPIAVAVLAIAATLAMISTRKTSVFNWIASAINTVVILFVIIAGFANADPSNLTPFLPYGAKGIFQAAAIVYFAYGGFDNIATMAEETKNPSRDIPLGLLGSMSIITVIYCLMALALSMMQDYRDIDRQAAYSLAFQSVGMKWAKYLVALGALKGMTTVLLVGALGQARYVTHIARAHMIPPWFALVHPKTGTPINATLLIVISSALIAFFSSLDVLASLLSVSTLFVFMMMAVALLVRRYYVTGVTPRINLLKLVIFLLIIVASSMGTSAYWGLNPNGWVGYAITIPLWVLGTAGISVFLPQQRTPKVWGVPLVPWLPSLSIATNLFLMGSLESKAFIRFGVCTVLMLVYYVFFGLHATYDVAHQQQKPESLKLKFNISASF* 703
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 984734 987272 - Vvi1g97 Vvi1g97 769297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g97 702 Pfam C-terminus of AA_permease 629 678 IPR029485 -
Vvi1g97 702 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 126 693 - -
Vvi1g97 702 Pfam Amino acid permease 191 605 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vvi1g97 702 Gene3D Amino acid/polyamine transporter I 185 615 - -
Vvi1g97 702 PANTHER CATIONIC AMINO ACID TRANSPORTER 5 126 693 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g97 - - vvi:100254353 1124.77