Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi1randomg2 | ATGACTAAAAACGATGAAACGTCACTATCATCATCGGCATCAGCATCGAGAGCTTCTGCTCCTCTACGGCCTACTATAACGCTGCCCCCTCGTTCCTCCATGGAAACTCTCTTTCCTGGAGGTCCCGGCTTCAGTCCCGGTCCCATGACTCTCGTCTCTAATTTTTTCTCCGACAACGACCCCGACTCCGACTGCCGCTCCTTCTCTCAGCTGCTCGCCGGCGCTATGGCCTCGCCCGCAGCTTTTCCCGGCCCCAGGCCCAGTTTTTCCACCGACCCTCAGGTCTCCGCTTCTTCCAAGGAAGACAGGACTTCCGTTGATGCCGCTGGTGATTTTGAATTTCGGTTCAAGCAGAACCGGCCCTCCGGTTTGGTGATTGCTCAGTCCCCGTTGTTTACAGTTCCTCCCGGGTTAAGCCCGACCTGTTTGCTCGATTCCCCAGGTTTCTTTTCGCAGGGACCATTTGTAATGTCCCATCAGCAGGCCTTAGCTCAGGTTACCGCTCAGGCTGCACAAGCCCATTCCCATATGCAACTCCAAGCCAAATTTCCGTCTTCTTTATCACAGATGCCACCCTTAGTATCAGATACTAGAACTGCTGTGAAGGAATCATCTGGTTTATCTCAATCTGATCAGAGATCCCAACCTTCTTCATTTACAGTTGATAAGCCTGCTGATGATGGCTACAATTGGCGGAAATATGGGCAGAAGCAAGTGAAGGGAAGTGAATATCCTCGAAGCTATTACAAATGTACACATCCAAGTTGTCCTGTTAAAAAAAAGGTTGAACGTTCTCTTGATGGCCAAGTAACAGAGATTATTTATAAGGGCCAGCACAACCATCAAGCACCACTACCCAACAAGCAATCTAGTCAAGCCATACCTGAACACTTACCTGGATCAAGTGACAGTGAGGAAATGGATGATGCTGAGACTAGAGGTGATGAAAAGGGTGAAGATGAACCTGACCCCAAAAGAAGGAATACAGAGGTCAGGGTTTCAGATCAGGTTTCCTCCCATAGAACAGTCACAGAACCTAGGATTATTGTGCAGACAACCAGTGAAGTTGATCTCTTGGATGATGGCTATAGGTGGCGCAAGTATGGGCAGAAAGTTGTCAAAGGAAATCCTTATCCAAGGAGCTACTATAAATGCACAAATCCAGGATGCAATGTCCGTAAGCATGTTGAGAGGGCAGCAACAGACCCGAAAGCCGTCATAACAACATATGAAGGTAAACATAATCATGATGTGCCAGCAGCTAAAAGTAGTAGCCACAACACAGCCAACAGCATTGCATCACAATAA | 1308 | 48.09 | MTKNDETSLSSSASASRASAPLRPTITLPPRSSMETLFPGGPGFSPGPMTLVSNFFSDNDPDSDCRSFSQLLAGAMASPAAFPGPRPSFSTDPQVSASSKEDRTSVDAAGDFEFRFKQNRPSGLVIAQSPLFTVPPGLSPTCLLDSPGFFSQGPFVMSHQQALAQVTAQAAQAHSHMQLQAKFPSSLSQMPPLVSDTRTAVKESSGLSQSDQRSQPSSFTVDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHPSCPVKKKVERSLDGQVTEIIYKGQHNHQAPLPNKQSSQAIPEHLPGSSDSEEMDDAETRGDEKGEDEPDPKRRNTEVRVSDQVSSHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTNPGCNVRKHVERAATDPKAVITTYEGKHNHDVPAAKSSSHNTANSIASQ* | 436 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi1randomg2 | 435 | MobiDBLite | consensus disorder prediction | 414 | 435 | - | - | |
Vvi1randomg2 | 435 | MobiDBLite | consensus disorder prediction | 89 | 103 | - | - | |
Vvi1randomg2 | 435 | ProSiteProfiles | WRKY domain profile. | 354 | 419 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi1randomg2 | 435 | MobiDBLite | consensus disorder prediction | 183 | 237 | - | - | |
Vvi1randomg2 | 435 | Pfam | WRKY DNA -binding domain | 226 | 282 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi1randomg2 | 435 | Pfam | WRKY DNA -binding domain | 360 | 417 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi1randomg2 | 435 | SUPERFAMILY | WRKY DNA-binding domain | 223 | 284 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi1randomg2 | 435 | MobiDBLite | consensus disorder prediction | 1 | 43 | - | - | |
Vvi1randomg2 | 435 | SMART | WRKY_cls | 359 | 418 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi1randomg2 | 435 | SMART | WRKY_cls | 225 | 283 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi1randomg2 | 435 | MobiDBLite | consensus disorder prediction | 282 | 298 | - | - | |
Vvi1randomg2 | 435 | Gene3D | WRKY domain | 213 | 285 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi1randomg2 | 435 | Gene3D | WRKY domain | 344 | 420 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi1randomg2 | 435 | MobiDBLite | consensus disorder prediction | 79 | 103 | - | - | |
Vvi1randomg2 | 435 | ProSiteProfiles | WRKY domain profile. | 226 | 284 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi1randomg2 | 435 | MobiDBLite | consensus disorder prediction | 279 | 344 | - | - | |
Vvi1randomg2 | 435 | MobiDBLite | consensus disorder prediction | 317 | 334 | - | - | |
Vvi1randomg2 | 435 | SUPERFAMILY | WRKY DNA-binding domain | 351 | 419 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi1randomg2 | 435 | MobiDBLite | consensus disorder prediction | 183 | 221 | - | - | |
Vvi1randomg2 | 435 | MobiDBLite | consensus disorder prediction | 421 | 435 | - | - | |
Vvi1randomg2 | 435 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Vvi1randomg2 | 435 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 17 | 291 | IPR044810 | GO:0003700 | |
Vvi1randomg2 | 435 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 289 | 434 | IPR044810 | GO:0003700 | |
Vvi1randomg2 | 435 | PANTHER | OS12G0507300 PROTEIN | 17 | 291 | - | - | |
Vvi1randomg2 | 435 | PANTHER | OS12G0507300 PROTEIN | 289 | 434 | - | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
14559 | PF03106 | WRKY | 1.10E-25 | CL0274 | Vvi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi1randomg2 | - | - | vvi:100233123 | 794.653 |