Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi2g118 | ATGGACACTGGTTTGAAATGGCAGCAGAAGACTCTGGTCAATGAGCTTACTCAAGGGATGGAGCTGGCAAAGCAGTTGAAGATCCATTTGAGTCCATCTTCAATGAGCCAGACCCAAGAATTCTTGGTACATAAGATAGTAGCATCATTTGAGAAGGCTCTTTTGATAGTCAAATGGAGTGGGCCAGTGGAAAACCCTCAGCCAGTGGCACCTTCATCTGCTCCCCAGTCTCCCCTTTCTGTCAATGGAAGTCCCCGGACTGTGAGCGAGGATTTTGACAAGGGTTGTAAGGATCATCATCAGGAACACAAAGATTTCTCAAAGAAGAGAAAGACATTGCCCACATGGACCGATCAAGTGAGAGTCTGCTCTGAGACCGGGCTTGAAGGGCCCCATGATGATGGCTACAACTGGAGAAAATATGGGCAGAAGGACATTCTTGGAGCTAAATACCCCAGAAGCTACTACAGATGCACCTACAGAAACCTCCACGACTGTTGGGCAACAAAGCAAGTTCAGCGTTCGGATGAAGATCCCTCCATGTTCGAGATCACATACCGAGGAAAGCATACTTGCACCCAAGGCAGTCATTCAGTGCCAGCACCAGCATCACCTGAAAAGCAAGAGATAAAACAGAACCACCATAACGACAATAACCATCAGCAACAGCATTACATAGAGAACCCCTTGAACTATTCCTCCATGGCTTCAACATCTTACGGATGCATGAAGAGTGAAACCAGCCTGTTCCCACAGCCTTCAGCTTTCAACAAGGACAACTATGACAACCTCTTGGGCTGTTATTCTCCCACATTTATATCCCCAGCGACGTCCGATTCAAACTGCTTCTCACTGTCTCCATGCCAGATGAGCAACTTTGGAGGGCCTCCCAATCTTCAACATTCAGAATCTGAGCTCACTGAAATTATCTCAGCAGCCAATTCTCCAATTCTGAACTTGGAGTTTCCCCTTGATCAAGTGGACTTTGATCCCAGTTTCCCATTTAATACCCCAGGATTTTTCTCCTAG | 1029 | 46.74 | MDTGLKWQQKTLVNELTQGMELAKQLKIHLSPSSMSQTQEFLVHKIVASFEKALLIVKWSGPVENPQPVAPSSAPQSPLSVNGSPRTVSEDFDKGCKDHHQEHKDFSKKRKTLPTWTDQVRVCSETGLEGPHDDGYNWRKYGQKDILGAKYPRSYYRCTYRNLHDCWATKQVQRSDEDPSMFEITYRGKHTCTQGSHSVPAPASPEKQEIKQNHHNDNNHQQQHYIENPLNYSSMASTSYGCMKSETSLFPQPSAFNKDNYDNLLGCYSPTFISPATSDSNCFSLSPCQMSNFGGPPNLQHSESELTEIISAANSPILNLEFPLDQVDFDPSFPFNTPGFFS* | 343 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1228313 | 1229702 | - | Vvi2g118 | Vvi2g118 | 782817 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi2g118 | 342 | MobiDBLite | consensus disorder prediction | 67 | 107 | - | - | |
Vvi2g118 | 342 | MobiDBLite | consensus disorder prediction | 90 | 107 | - | - | |
Vvi2g118 | 342 | PANTHER | WRKY TRANSCRIPTION FACTOR 41-RELATED | 1 | 338 | - | - | |
Vvi2g118 | 342 | Pfam | WRKY DNA -binding domain | 133 | 192 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi2g118 | 342 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 1 | 338 | IPR044810 | GO:0003700 | |
Vvi2g118 | 342 | SUPERFAMILY | WRKY DNA-binding domain | 131 | 194 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi2g118 | 342 | Gene3D | WRKY domain | 118 | 195 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi2g118 | 342 | ProSiteProfiles | WRKY domain profile. | 127 | 190 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vvi2g118 | 342 | SMART | WRKY_cls | 132 | 194 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Event-related genes

Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
14561 | PF03106 | WRKY | 2.40E-27 | CL0274 | Vvi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi2g118 | - | - | vvi:100253577 | 707.983 |