Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g144 ATGAATGAAGTGACCTCTTGCGATACATCAAACAGTGTTGAAGAAAAGTCGAAGATCGATGCCGTGAAGCTGAATTCAAAGCCTTCGACGAGCGAATCTTCTGCACTGGAGAGGTCGAAACTGGCGTCGCAGAGCGGTGGGGCACCGGGCGGAGTAGTGTTCGCTGGAGGTGAGAGCAAGGGAGAGGCGGAGCTCGACGTGTATACCACATGGATCAGCGCCGGTGATCGGGTGGAGGTGGGCGATGGGAGACGCCATGACGGTGGCGCTGGGAGGGCTCGCCTGGTGCGATTCCCTGCCAGCGATGGAAGACACCCTGACTGTGGCACCGGGAGAGCTCGAGTTGTACGATTTCTACGCCGTGTACGACGGCCACGGCGGGGATCAGGTGGCGCACGCGTGCCGTCGGCATCTTCATTGCTGAGGTCGATGGGGTCGACGGCCGTGGTGGTGGTGGTCGGCGCAGAGAAGCTTGTGATAGCCAATTGTGGCGATTCGAGAGCTGTCCTATGCTGCAACGGCGTTGCCGTGCCATTATCTCGTGATCATAAGCCTGATAGACCTGATGAAAGGGAAAGGGTGGAAGCTGCCGGAGGAAACGTCATAAATTGGGATGGTTTTCGCGTCCTAGGAGTGCTTTCTATCTCACGATCAATAGGAGATTACTTTCTCAGGCCATATGTGATCTCCGAACCAGAAGTGACAGTTTGGGAACGAAAAGAGTCGGACGAGTTCCTTGTAATAGCAACTGATGGGCTATGGGATGTGGTTACTAACGAGCTTGCCTGCAAGTTGGTGAAGAGGTACCTCAGTGGCAAAATTCGGAGGAGATTCTCAGAGGGAACAAATGCGAGTTGTGCTATGGAGGCAGCTTCCATACTAACTGAACTGGCTATGGCTCGAGGAAGCAAAGACAATATCAGCGTGATAGTAGTCCAGCTGAAGAAACATCACTGCCATGGCAGTCTCAAGAAACCCAATAGGTCAAGCCCTTAG 996 54.02 MNEVTSCDTSNSVEEKSKIDAVKLNSKPSTSESSALERSKLASQSGGAPGGVVFAGGESKGEAELDVYTTWISAGDRVEVGDGRRHDGGAGRARLVRFPASDGRHPDCGTGRARVVRFLRRVRRPRRGSGGARVPSASSLLRSMGSTAVVVVVGAEKLVIANCGDSRAVLCCNGVAVPLSRDHKPDRPDERERVEAAGGNVINWDGFRVLGVLSISRSIGDYFLRPYVISEPEVTVWERKESDEFLVIATDGLWDVVTNELACKLVKRYLSGKIRRRFSEGTNASCAMEAASILTELAMARGSKDNISVIVVQLKKHHCHGSLKKPNRSSP* 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1482107 1488349 + Vvi2g144 Vvi2g144 782843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g144 331 MobiDBLite consensus disorder prediction 23 41 - -
Vvi2g144 331 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 90 316 - -
Vvi2g144 331 SMART PP2C_4 43 312 IPR001932 -
Vvi2g144 331 PANTHER ALPHABET, ISOFORM E-RELATED 90 316 - -
Vvi2g144 331 SUPERFAMILY PP2C-like 140 315 IPR036457 -
Vvi2g144 331 CDD PP2Cc 141 314 IPR001932 -
Vvi2g144 331 Gene3D - 118 320 IPR036457 -
Vvi2g144 331 ProSiteProfiles PPM-type phosphatase domain profile. 66 314 IPR001932 -
Vvi2g144 331 MobiDBLite consensus disorder prediction 1 55 - -
Vvi2g144 331 Pfam Protein phosphatase 2C 140 307 IPR001932 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g144 K14497 - vvi:100241034 418.313