Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g198 ATGGAAAGCTCGTGGAGAAGACGAGGGTCTTTGATCGTCGCGGCGATCGTGTGTTTCGGATTTCTAGCTGCAATTTCCATTGCAAAAGAGGAAGCAACCAAGTTGGGAACTGTCATCGGGATAGATCTTGGAACAACCTACTCATGTGTTGGTGTTTACAAGAACGGTCATGTTGAAATCATAGCAAATGACCAAGGAAATCGTATTACCCCTTCATGGGTTGCCTTCACTGACAGTGAGAGACTGATTGGTGAGGCTGCGAAGAACCAGGCGGCTGTCAATGCCGAAAGGACTATCTTTGATGTGAAGAGGCTTATTGGAAGAAAGTTTGAAGATAAGGAGGTTCAGAAGGACATGAAGCTTGTTCCGTACAACATTGTTAACAAGGATGGGAAGCCTTACATTCAAGTCAAGATCAAGGATGGTGAGACCAAGGTTTTCAGCCCTGAGGAGATCAGTGCAATGATTTTGACTAAGATGAAGGAGACAGCTGAAGCATTCCTTGGGAAGAAGATCAAGGATGCTGTCGTTACTGTGCCCGCTTACTTCAATGATGCCCAGAGGCAGGCTACAAAGGATGCTGGCGTTATTGCTGGCCTGAATGTTGCACGAATTATTAATGAGCCAACTGCTGCAGCTATTGCATACGGTTTGGACAAGAAGGGTGGTGAGAAGAACATCCTTGTTTTTGACCTTGGTGGTGGAACCTTCGATGTCAGCATCTTGACTATTGACAATGGTGTTTTCGAGGTTCTTGCTACAAATGGAGACACTCATTTGGGAGGTGAGGATTTTGACCAGAGGATTATGGAGTACTTTATCAAGTTGATTAAGAAGAAGCACGGAAAGGACATCAGCAAGGACAACAGAGCTCTTGGGAAGCTGAGGAGAGAAGCTGAGCGTGCCAAGAGAGCCTTGAGTAGCCAGCACCAAGTCCGAGTGGAGATTGAATCTCTCTATGATGGTTTGGATTTCTCTGAACCCCTGACCCGTGCCAGGTTTGAAGAGTTGAACAATGATTTGTTCAGAAAGACCATGGGACCTGTGAAGAAGGCAATGGAAGATGCTGGATTGGAGAAGAGACAGATTGATGAAATTGTTCTTGTTGGTGGAAGCACAAGGATTCCAAAGGTTCAACAACTCCTCAAGGACTACTTTGATGGAAAGGAACCCAACAAGGGTGTGAACCCAGATGAGGCTGTTGCCTTTGGTGCTGCTGTACAAGGAAGCATTTTGAGTGGAGAGGGTGGTGATGAGACCAAAGATATTCTTCTCTTGGATGTGGCTCCGCTCACTCTTGGAATTGAAACCGTTGGTGGGGTGATGACCAAGTTGATTCCTAGGAACACTGTTATCCCGACCAAGAAATCTCAAGTTTTCACTACTTACCAGGATCAGCAGACCACCGTCTCCATTCAGGTTTTTGAAGGTGAAAGGAGTCTCACAAAGGACTGCCGACAGCTCGGGAAATTTGATCTTAATGGAATCCCTCCAGCTCCAAGGGGAACCCCACAAATTGAAGTCACGTTTGAAGTTGACGCAAATGGTATCCTAAATGTCAAGGCTGAGGACAAGGGCACGGGTAAATCAGAGAAGATCACCATCACAAATGACAAGGGCCGCCTGAGCCAGGAGGAGATTGACCGTATGGTTCGTGAGGCGGAAGAGTTTGCAGAGGAAGACAAGAAGGTGAAGGAGAAGATTGATGAGGTGGAAGCTGTCTGCAACCCAATCATCACAGCTGTTTACCAGAGATCAGGCGGAGCCCCAGGTGCTGGGTCAGATGGAGGAGAAGACGATGATTCCCATGATGAACTTTGA 1821 46.84 MESSWRRRGSLIVAAIVCFGFLAAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNAERTIFDVKRLIGRKFEDKEVQKDMKLVPYNIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRALSSQHQVRVEIESLYDGLDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKRQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAFGAAVQGSILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRQLGKFDLNGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDEVEAVCNPIITAVYQRSGGAPGAGSDGGEDDDSHDEL* 607
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1900756 1904873 + Vvi2g198 Vvi2g198 782897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g198 606 Coils Coil 547 574 - -
Vvi2g198 606 SUPERFAMILY Actin-like ATPase domain 223 414 IPR043129 -
Vvi2g198 606 PRINTS 70kDa heat shock protein signature 37 50 - -
Vvi2g198 606 PRINTS 70kDa heat shock protein signature 65 77 - -
Vvi2g198 606 PRINTS 70kDa heat shock protein signature 87 95 - -
Vvi2g198 606 PRINTS 70kDa heat shock protein signature 175 195 - -
Vvi2g198 606 PRINTS 70kDa heat shock protein signature 235 245 - -
Vvi2g198 606 PRINTS 70kDa heat shock protein signature 363 379 - -
Vvi2g198 606 PRINTS 70kDa heat shock protein signature 395 415 - -
Vvi2g198 606 PRINTS 70kDa heat shock protein signature 422 441 - -
Vvi2g198 606 PRINTS 70kDa heat shock protein signature 503 519 - -
Vvi2g198 606 Pfam Hsp70 protein 38 572 IPR013126 GO:0005524|GO:0140662
Vvi2g198 606 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 419 569 IPR029047 -
Vvi2g198 606 ProSitePatterns Heat shock hsp70 proteins family signature 3. 366 380 IPR018181 -
Vvi2g198 606 Coils Coil 285 305 - -
Vvi2g198 606 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 411 585 IPR029047 -
Vvi2g198 606 ProSitePatterns Heat shock hsp70 proteins family signature 2. 229 242 IPR018181 -
Vvi2g198 606 Gene3D Actin; Chain A, domain 4 261 344 - -
Vvi2g198 606 PANTHER HEAT SHOCK PROTEIN 70KDA 566 592 IPR013126 GO:0005524|GO:0140662
Vvi2g198 606 PANTHER HEAT SHOCK PROTEIN 70KDA 23 569 IPR013126 GO:0005524|GO:0140662
Vvi2g198 606 SUPERFAMILY Actin-like ATPase domain 36 220 IPR043129 -
Vvi2g198 606 ProSitePatterns Heat shock hsp70 proteins family signature 1. 41 48 IPR018181 -
Vvi2g198 606 Gene3D - 221 395 - -
Vvi2g198 606 Gene3D - 39 410 - -
Vvi2g198 606 MobiDBLite consensus disorder prediction 584 606 - -
Vvi2g198 606 CDD HSPA5-like_NBD 36 410 IPR042050 -
Vvi2g198 606 PANTHER LUMINAL-BINDING PROTEIN 566 592 - -
Vvi2g198 606 PANTHER LUMINAL-BINDING PROTEIN 23 569 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi2g198 Vvi16g1017 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g198 K09490 - vvi:100251379 1095.11