Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi2g198 | ATGGAAAGCTCGTGGAGAAGACGAGGGTCTTTGATCGTCGCGGCGATCGTGTGTTTCGGATTTCTAGCTGCAATTTCCATTGCAAAAGAGGAAGCAACCAAGTTGGGAACTGTCATCGGGATAGATCTTGGAACAACCTACTCATGTGTTGGTGTTTACAAGAACGGTCATGTTGAAATCATAGCAAATGACCAAGGAAATCGTATTACCCCTTCATGGGTTGCCTTCACTGACAGTGAGAGACTGATTGGTGAGGCTGCGAAGAACCAGGCGGCTGTCAATGCCGAAAGGACTATCTTTGATGTGAAGAGGCTTATTGGAAGAAAGTTTGAAGATAAGGAGGTTCAGAAGGACATGAAGCTTGTTCCGTACAACATTGTTAACAAGGATGGGAAGCCTTACATTCAAGTCAAGATCAAGGATGGTGAGACCAAGGTTTTCAGCCCTGAGGAGATCAGTGCAATGATTTTGACTAAGATGAAGGAGACAGCTGAAGCATTCCTTGGGAAGAAGATCAAGGATGCTGTCGTTACTGTGCCCGCTTACTTCAATGATGCCCAGAGGCAGGCTACAAAGGATGCTGGCGTTATTGCTGGCCTGAATGTTGCACGAATTATTAATGAGCCAACTGCTGCAGCTATTGCATACGGTTTGGACAAGAAGGGTGGTGAGAAGAACATCCTTGTTTTTGACCTTGGTGGTGGAACCTTCGATGTCAGCATCTTGACTATTGACAATGGTGTTTTCGAGGTTCTTGCTACAAATGGAGACACTCATTTGGGAGGTGAGGATTTTGACCAGAGGATTATGGAGTACTTTATCAAGTTGATTAAGAAGAAGCACGGAAAGGACATCAGCAAGGACAACAGAGCTCTTGGGAAGCTGAGGAGAGAAGCTGAGCGTGCCAAGAGAGCCTTGAGTAGCCAGCACCAAGTCCGAGTGGAGATTGAATCTCTCTATGATGGTTTGGATTTCTCTGAACCCCTGACCCGTGCCAGGTTTGAAGAGTTGAACAATGATTTGTTCAGAAAGACCATGGGACCTGTGAAGAAGGCAATGGAAGATGCTGGATTGGAGAAGAGACAGATTGATGAAATTGTTCTTGTTGGTGGAAGCACAAGGATTCCAAAGGTTCAACAACTCCTCAAGGACTACTTTGATGGAAAGGAACCCAACAAGGGTGTGAACCCAGATGAGGCTGTTGCCTTTGGTGCTGCTGTACAAGGAAGCATTTTGAGTGGAGAGGGTGGTGATGAGACCAAAGATATTCTTCTCTTGGATGTGGCTCCGCTCACTCTTGGAATTGAAACCGTTGGTGGGGTGATGACCAAGTTGATTCCTAGGAACACTGTTATCCCGACCAAGAAATCTCAAGTTTTCACTACTTACCAGGATCAGCAGACCACCGTCTCCATTCAGGTTTTTGAAGGTGAAAGGAGTCTCACAAAGGACTGCCGACAGCTCGGGAAATTTGATCTTAATGGAATCCCTCCAGCTCCAAGGGGAACCCCACAAATTGAAGTCACGTTTGAAGTTGACGCAAATGGTATCCTAAATGTCAAGGCTGAGGACAAGGGCACGGGTAAATCAGAGAAGATCACCATCACAAATGACAAGGGCCGCCTGAGCCAGGAGGAGATTGACCGTATGGTTCGTGAGGCGGAAGAGTTTGCAGAGGAAGACAAGAAGGTGAAGGAGAAGATTGATGAGGTGGAAGCTGTCTGCAACCCAATCATCACAGCTGTTTACCAGAGATCAGGCGGAGCCCCAGGTGCTGGGTCAGATGGAGGAGAAGACGATGATTCCCATGATGAACTTTGA | 1821 | 46.84 | MESSWRRRGSLIVAAIVCFGFLAAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNAERTIFDVKRLIGRKFEDKEVQKDMKLVPYNIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRALSSQHQVRVEIESLYDGLDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKRQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAFGAAVQGSILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRQLGKFDLNGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDEVEAVCNPIITAVYQRSGGAPGAGSDGGEDDDSHDEL* | 607 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1900756 | 1904873 | + | Vvi2g198 | Vvi2g198 | 782897 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi2g198 | 606 | Coils | Coil | 547 | 574 | - | - | |
Vvi2g198 | 606 | SUPERFAMILY | Actin-like ATPase domain | 223 | 414 | IPR043129 | - | |
Vvi2g198 | 606 | PRINTS | 70kDa heat shock protein signature | 37 | 50 | - | - | |
Vvi2g198 | 606 | PRINTS | 70kDa heat shock protein signature | 65 | 77 | - | - | |
Vvi2g198 | 606 | PRINTS | 70kDa heat shock protein signature | 87 | 95 | - | - | |
Vvi2g198 | 606 | PRINTS | 70kDa heat shock protein signature | 175 | 195 | - | - | |
Vvi2g198 | 606 | PRINTS | 70kDa heat shock protein signature | 235 | 245 | - | - | |
Vvi2g198 | 606 | PRINTS | 70kDa heat shock protein signature | 363 | 379 | - | - | |
Vvi2g198 | 606 | PRINTS | 70kDa heat shock protein signature | 395 | 415 | - | - | |
Vvi2g198 | 606 | PRINTS | 70kDa heat shock protein signature | 422 | 441 | - | - | |
Vvi2g198 | 606 | PRINTS | 70kDa heat shock protein signature | 503 | 519 | - | - | |
Vvi2g198 | 606 | Pfam | Hsp70 protein | 38 | 572 | IPR013126 | GO:0005524|GO:0140662 | |
Vvi2g198 | 606 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 419 | 569 | IPR029047 | - | |
Vvi2g198 | 606 | ProSitePatterns | Heat shock hsp70 proteins family signature 3. | 366 | 380 | IPR018181 | - | |
Vvi2g198 | 606 | Coils | Coil | 285 | 305 | - | - | |
Vvi2g198 | 606 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 411 | 585 | IPR029047 | - | |
Vvi2g198 | 606 | ProSitePatterns | Heat shock hsp70 proteins family signature 2. | 229 | 242 | IPR018181 | - | |
Vvi2g198 | 606 | Gene3D | Actin; Chain A, domain 4 | 261 | 344 | - | - | |
Vvi2g198 | 606 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 566 | 592 | IPR013126 | GO:0005524|GO:0140662 | |
Vvi2g198 | 606 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 23 | 569 | IPR013126 | GO:0005524|GO:0140662 | |
Vvi2g198 | 606 | SUPERFAMILY | Actin-like ATPase domain | 36 | 220 | IPR043129 | - | |
Vvi2g198 | 606 | ProSitePatterns | Heat shock hsp70 proteins family signature 1. | 41 | 48 | IPR018181 | - | |
Vvi2g198 | 606 | Gene3D | - | 221 | 395 | - | - | |
Vvi2g198 | 606 | Gene3D | - | 39 | 410 | - | - | |
Vvi2g198 | 606 | MobiDBLite | consensus disorder prediction | 584 | 606 | - | - | |
Vvi2g198 | 606 | CDD | HSPA5-like_NBD | 36 | 410 | IPR042050 | - | |
Vvi2g198 | 606 | PANTHER | LUMINAL-BINDING PROTEIN | 566 | 592 | - | - | |
Vvi2g198 | 606 | PANTHER | LUMINAL-BINDING PROTEIN | 23 | 569 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Vvi2g198 | Vvi16g1017 | ECH |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi2g198 | K09490 | - | vvi:100251379 | 1095.11 |