Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g201 ATGGCTGTTACCGAAGCTTCATCGCAGTGCTCTCCTGTGAAGCCCACCACCCCACTCGTCACCTTCCTTGATCGCCTCCAAGAAACGGCCTTCAAAACCTATGGCAACTCCGACTTCGACCCAAAGCTTTACGTGGATTTGTCTCTGAAATTCAATCTCTCAGACACAGAGGAGGCTTTTAAGAAGCTACCCAGGTCTGAAAATGGGTCGGTTTCGGTTGAGATTTTGGAGGGGTTTATGGGAGAGTACATGCGAGGTGCAGGGGAAGATTTGGTGGAGGTTGTGCCGGAGGATTATGTGCCGGAGCCGACGGGGTTCTTGCCGAAGGTGGAGATTTCGAACGGGGTTCGGGATCGGCCGGACCTGCACACTCTGCTTCCTCTTCCTAATCCAGTGGTGATTCCTGGATCGAGATTTAGAGAGGTTTACTATTGGGATTCTTACTGGGTTATTCGGGGCTTGCTAGCAAGTAAAATGCATGAGACGGCAAAAGCAATTGTTGCTAATCTGATTTCACTTATCGATGAATATGGTTATGTCCTAAACGGTGCAAGGGCATATTACAGCAATCGGAGCCAGCCCCCGCTCCTGAGTTCCATGATCTATGAAATATACAAGAGAACGGGTGATAAAGAAATGGTGAGAAAGTCTCTCCCTGCTTTGCTCAAGGAACATCAGTTTTGGAATTCAGGGAAACATAAGATGACCATTCAGGATGATCAAGCCTGTAATCACACTTTGAGTCGGTACTATGCAATGTGGGATAAACCGAGACCAGAGTCTTCAACTAATGACAAGGAGTCTGCTTCCAAGATCTTGGATGCTTCGGAGAAACAGCAATTTTACAGGGAACTGGCTTCAACTGCTGAATCTGGATGGGATTTCAGCACAAGATGGATGAGGAATTCTTCAGATTTCACGACATTGGCTACAACATCAATTCTACCCGTGGATTTGAATGCATTTATACTGAAGATGGAGCTTGACATAGCCTCCTTGGCAAAAGTTATTGGAGAAAATACCATCTCTGAACGCTTTGTGGAAGCTTCTCAAGGGAGAAAAAAGGCAATGGACTCTGTTTTCTGGAATGCAAAGATGGGACAATGGGTTGACTACTGGCTCGGTGACAATTCCACTTCATGCAAGGAAGTTCATAAATTAGAAGCTTCAAACCAGAACGAGAACGTGTTTGCTTCAAACTTTGTTCCTCTATGGATTGAGTTGTTTAACTCGGATGCTTCTGTGGTGGAGAAAGTTATGGAAAGTTTCCAAAGTTCGGGTTTGCTTTGCTCTGCTGGGATTGCAACTTCCTTGACAAATTCGGGACAACAATGGGATTTTCCAAATGGTTGGGCTCCAATTCAACACATGATAGTTGAAGGCCTGGTGAGATCTGGATTGAAAGAAGCAAGGTTGATGGCAGAAGATATTGCTATGAGGTGGATCAGAACCAACTATGCTGCCTACAAGAACACAAGCACAATGCTTGAAAAATATGATGTGGAAGAATGTGGAAAAATTGGAGGTGGCGGTGAATACATACCCCAGACTGGTTTTGGCTGGACAAATGGTGTTGTATTGGCATTCCTGGAGGAGTTTGGATGGACTAAGGACCAGAAGCTAGATTGCCAGTAA 1635 45.38 MAVTEASSQCSPVKPTTPLVTFLDRLQETAFKTYGNSDFDPKLYVDLSLKFNLSDTEEAFKKLPRSENGSVSVEILEGFMGEYMRGAGEDLVEVVPEDYVPEPTGFLPKVEISNGVRDRPDLHTLLPLPNPVVIPGSRFREVYYWDSYWVIRGLLASKMHETAKAIVANLISLIDEYGYVLNGARAYYSNRSQPPLLSSMIYEIYKRTGDKEMVRKSLPALLKEHQFWNSGKHKMTIQDDQACNHTLSRYYAMWDKPRPESSTNDKESASKILDASEKQQFYRELASTAESGWDFSTRWMRNSSDFTTLATTSILPVDLNAFILKMELDIASLAKVIGENTISERFVEASQGRKKAMDSVFWNAKMGQWVDYWLGDNSTSCKEVHKLEASNQNENVFASNFVPLWIELFNSDASVVEKVMESFQSSGLLCSAGIATSLTNSGQQWDFPNGWAPIQHMIVEGLVRSGLKEARLMAEDIAMRWIRTNYAAYKNTSTMLEKYDVEECGKIGGGGEYIPQTGFGWTNGVVLAFLEEFGWTKDQKLDCQ* 545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1935458 1939794 + Vvi2g201 Vvi2g201 782900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g201 544 ProSitePatterns Trehalase signature 2. 444 453 IPR018232 GO:0004555|GO:0005991
Vvi2g201 544 PRINTS Glycosyl hydrolase family 37 signature 177 195 IPR001661 GO:0004555|GO:0005991
Vvi2g201 544 PRINTS Glycosyl hydrolase family 37 signature 247 264 IPR001661 GO:0004555|GO:0005991
Vvi2g201 544 PRINTS Glycosyl hydrolase family 37 signature 282 299 IPR001661 GO:0004555|GO:0005991
Vvi2g201 544 PRINTS Glycosyl hydrolase family 37 signature 314 331 IPR001661 GO:0004555|GO:0005991
Vvi2g201 544 PRINTS Glycosyl hydrolase family 37 signature 437 453 IPR001661 GO:0004555|GO:0005991
Vvi2g201 544 PRINTS Glycosyl hydrolase family 37 signature 517 530 IPR001661 GO:0004555|GO:0005991
Vvi2g201 544 SUPERFAMILY Six-hairpin glycosidases 34 535 IPR008928 GO:0005975
Vvi2g201 544 PANTHER TREHALASE 6 544 IPR001661 GO:0004555|GO:0005991
Vvi2g201 544 Gene3D - 33 543 IPR012341 GO:0005975
Vvi2g201 544 PANTHER TREHALASE 6 544 - -
Vvi2g201 544 Pfam Trehalase 111 534 IPR001661 GO:0004555|GO:0005991
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g201 K01194 - vvi:100246241 1083.94