Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi2g209	ATGGATACTGCTCAGTGGCCACAGGAGATTGTGGTGAAACCACTAGAGGAGATAGTCACAAATACATGTCCAAAGCCTGCTTTGGAGAAGAGGGCAAGACCTCAGAAAGAGCAAGCTTTGAACTGCCCAAGGTGCAATTCAACCAACACTAAGTTCTGCTATTACAACAACTACAGTCTCTCTCAGCCAAGGTACTTTTGCAAGGCTTGTAGAAGGTATTGGACTGAAGGTGGGTCTCTCAGAAATATTCCAGTTGGTGGGGGTTCAAGGAAGAACAAGAGATCATCATCTTCTTCTTCATCATCTTCATCTTCAGCTTCATCAAAGAAGCTTCCTGATCTGCCGCTCAAGATTTCAGAAGTCTTTGGAGCTGCTCACTGGGATCACTTCAAGGGGGTTGAATTCCTTCATGCCCATGCCAATTCCTGA	429	45.45	MDTAQWPQEIVVKPLEEIVTNTCPKPALEKRARPQKEQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKACRRYWTEGGSLRNIPVGGGSRKNKRSSSSSSSSSSSASSKKLPDLPLKISEVFGAAHWDHFKGVEFLHAHANS*	143

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
2	2012749	2013969	+	Vvi2g209	Vvi2g209	782908

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi2g209	142	PANTHER	DOF ZINC FINGER PROTEIN DOF4.6-LIKE	1	106	-	-
	Vvi2g209	142	ProSiteProfiles	Zinc finger Dof-type profile.	40	94	IPR003851	GO:0003677\|GO:0006355
	Vvi2g209	142	MobiDBLite	consensus disorder prediction	78	111	-	-
	Vvi2g209	142	ProSitePatterns	Zinc finger Dof-type signature.	42	78	IPR003851	GO:0003677\|GO:0006355
	Vvi2g209	142	Pfam	Dof domain, zinc finger	38	94	IPR003851	GO:0003677\|GO:0006355
	Vvi2g209	142	MobiDBLite	consensus disorder prediction	89	110	-	-
	Vvi2g209	142	PANTHER	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	1	106	IPR045174	GO:0003700\|GO:0006355

Event-related genes

Select	Gene_1	Gene_2	Event_name
	Vvi2g209	Vvi15g660	ECH
	Vvi2g209	Vvi16g1009	ECH

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	14569	PF02701	zf-Dof	2.60E-34	No_clan	Vvi	TF

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi2g209	-		-	vvi:100266812	219.164