Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g224 ATGCTGGTGCAAACCAGAGTGAGTTGCTACCAATACAAGGTTGGAGATTTGGATGCTTGGGGAATACCCTCCTCTGCAAATGCACATGTCTACACCAACTGGTCCAAGAACCACATTTTCAAGATTGGAGATTCTCTCCTGTTCTTATACCCACCAAGTCAAGATTCAGTGATTCAAGTCACAGGGCAGTCTTTCAATGCCTGCAACCTTACAGATCCAATCTTGTACATGAACAATGGTAATTCCCTCTTCAACATAACCTCCCTTGGCGAATTCTACTTCACCAGTGCAGTTCCAGGTCACTGTGAAAAGAAACAGAAGCTGCAAATTTCAGTGCTTTCTGGAAATGGCTCATCAGCATTCTCACCCTCTTATGGTCCTAGTGCTTTGCCTGATTCTTCTTACCCCACCGTCTTTGGCTCCATCCCTGCCGCAAATTCATCTTCACCATCACAGAGGGCGCCTGTGTTTTTAGCAGCTGTAATGGGATTTGTGTCATGGGATCTGATCAGAGGCAGAATGTGA 525 45.71 MLVQTRVSCYQYKVGDLDAWGIPSSANAHVYTNWSKNHIFKIGDSLLFLYPPSQDSVIQVTGQSFNACNLTDPILYMNNGNSLFNITSLGEFYFTSAVPGHCEKKQKLQISVLSGNGSSAFSPSYGPSALPDSSYPTVFGSIPAANSSSPSQRAPVFLAAVMGFVSWDLIRGRM* 175
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2121951 2123065 - Vvi2g224 Vvi2g224 782923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g224 174 PANTHER MAVICYANIN 3 166 - -
Vvi2g224 174 PANTHER BLUE COPPER PROTEIN 3 166 IPR039391 GO:0009055
Vvi2g224 174 Gene3D - 10 123 IPR008972 -
Vvi2g224 174 CDD OsENODL1_like 10 113 IPR041846 -
Vvi2g224 174 Pfam Plastocyanin-like domain 29 104 IPR003245 GO:0009055
Vvi2g224 174 ProSiteProfiles Phytocyanin domain profile. 10 114 IPR003245 GO:0009055
Vvi2g224 174 SUPERFAMILY Cupredoxins 9 113 IPR008972 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g224 - - vvi:100246223 357.836