Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g230 ATGGCCCGGACGGGGACTTCTCACAAAACCTACAGTGCGAATCCTAGCGATTACAAGCTCCTCGAAGAGGTCGGTTACGGCGCGAGCGCGACGGTGTACAGAGCGATCTATCTTCCTTTCAATGAAGTGGTGGCCGTTAAGTGTTTGGATCTCGATCGCTGCAATAGCAATCTGGATGACATACGTAGGGAGGCTCAAACAATGAGTTTGATTGACCATCCAAATGTAATAAAGGCATACTGTTCATTTGTTGTTGAAAGAAATCTTTGGGTGGTCATGCCGTTCATGGCAGAAGGCTCTTGCTTACACCTCATGAAGATAGCATATACGGATGGATTTGAAGAGTCAGCCATTGGTTCTATCCTGAAAGAGACTCTTAAAGCCTTGGAGTACCTCCATCGACATGGACATATCCATCGGGATGTTAAGGCTGGAAATATACTACTTGACAGTAATGGAGTGGTAAAACTTGCCGATTTTGGTGTTTCAGCATGCATGTTTGACAAAGGTGATAGACAACGTTCAAGAAATACTTTTGTAGGAACTCCATGCTGGATGGCACCCGAGGTTTTGCAACCAGGAAGTGGATATGATTTCAAGGCTGATATTTGGTCATTTGGCATAACAGCTCTGGAGCTGGCTCATGGTCATGCACCCTTTTCAAAATATCCCCCAATGAAGGTCCTTCTGATGACCATACAGAATGCTCCTCCTGGACTTGACTATGACCGTGATAAGAAGTTCTCTAAGTCTTTTAAAGAAATGGTTGCAATGTGCTTGGTGAAAGATCAAACAAAAAGGCCAACTGCTGAGAAGTTACTAAAACATTCCTTTTTCAAGCAAGCTAAGCCTCCAGAACTTTCTGTAAAGAAATTATTTGCTGAGTTGCCACCACTTTGGCAGCGTGTGAAAGCCCTTCAGCTTAAAGATGCTGCACAACTGGCTCTGAAAAAAATGCCTTCAGCAGAACAAGAGGCCATATCACAGAGTGAGTACAAGAGAGGTGTCAGTGCCTGGAATTTTGATATCGAGGATTTAAAAGTACAAGCATCATTGGTACAAGATGATGATGAAATACAAGAAATGAGGGAAGAAGATGAAAGCATGAAATCATTTGTTATTGATAAGGATTCATCTGATTCCAGATCTAGTTTGGGAAAATCAATCTCCACTAATGACAATTTTTTCAGAGGACGAATAACTGGTGATGAATTAGCACAGGCAGAGTGCTTGAGCAAAAAGGGAAAGAGTTTGAGAAGTGATTCACTCGAGTCTAGCAATCAAGAGAAAATTGGTCAGGAAAAGGATATATCAAGTGCTGAGATGATGCCATCAACCTCAGAGAAGGACATGGTCAATGCCAAGACTAAAACTCAGATGGTGAAAGGTCGCCAGACACAGAGTGGACCCCTGATGCCTGGTGTTGTGCTTAGTCATTCATTGTCAGACAGGGGGCGCTCCTTTGAAAGGTCCGAGAATGAAATTCAACCTATTACTGAGAAAGCTAACCGTGAAGTACGGCGAGCACCAAGCTTTAGTGGTCCATTGATGCTTCCGAATCGAGCTTCAGCAAACAGTTTATCTGCTCCAATAAAATCTTCAGCGGGATACAGAGATTCTTTGGAGGAGAAGTCAAAGGCCAATCTGGTGCAAATAAAAGGACGGTTCTCAGTAACATCTGAGAACGTAGATCTTGTAAAGGATATTCCATTATGTGCAGTTGCACGCCGATCCTCTCAGGGATCACCACTCAGGAAGTCTGCTAGTGTTGGTGATTGGATGTTTGATTCTAAACCAATGCTCACTACACCAAAGGACTTTAGCAACAGTAATGTACCCGCATCACTTCTCATGCCTCACCTTCAGAATCTTTTTCAGCAGACCTCACTTCAACAGGATCTCATTACGAATTTGTTGAATAGCTTGCAATCATCTGAGATAGTAGATGCTTCTCAAAATGGCAAATTGCCCCCGTTACCTCGTGGTTCAGAAAACAATGGAAATGTAGATCCAGGGGCTTCTGAAAGGGAGCGTTTGCTTCTCTTGAAAGTCTCTGAGCTTCAGGCTAGGATGATTAATTTAACTGACGAACTAACAGCAGAGAAGTTTAAATACATGCAACTGCAGCAGCAGCTAAATGCTGTGTCAGGTCAGGAAGAAGATGGGGACAAACGAGAAGGAGATGCTTGA 2190 43.29 MARTGTSHKTYSANPSDYKLLEEVGYGASATVYRAIYLPFNEVVAVKCLDLDRCNSNLDDIRREAQTMSLIDHPNVIKAYCSFVVERNLWVVMPFMAEGSCLHLMKIAYTDGFEESAIGSILKETLKALEYLHRHGHIHRDVKAGNILLDSNGVVKLADFGVSACMFDKGDRQRSRNTFVGTPCWMAPEVLQPGSGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKQAKPPELSVKKLFAELPPLWQRVKALQLKDAAQLALKKMPSAEQEAISQSEYKRGVSAWNFDIEDLKVQASLVQDDDEIQEMREEDESMKSFVIDKDSSDSRSSLGKSISTNDNFFRGRITGDELAQAECLSKKGKSLRSDSLESSNQEKIGQEKDISSAEMMPSTSEKDMVNAKTKTQMVKGRQTQSGPLMPGVVLSHSLSDRGRSFERSENEIQPITEKANREVRRAPSFSGPLMLPNRASANSLSAPIKSSAGYRDSLEEKSKANLVQIKGRFSVTSENVDLVKDIPLCAVARRSSQGSPLRKSASVGDWMFDSKPMLTTPKDFSNSNVPASLLMPHLQNLFQQTSLQQDLITNLLNSLQSSEIVDASQNGKLPPLPRGSENNGNVDPGASERERLLLLKVSELQARMINLTDELTAEKFKYMQLQQQLNAVSGQEEDGDKREGDA* 730
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2150786 2160118 - Vvi2g230 Vvi2g230 782929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g230 729 MobiDBLite consensus disorder prediction 651 672 - -
Vvi2g230 729 ProSiteProfiles Protein kinase domain profile. 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi2g230 729 CDD STKc_OSR1_SPAK 16 279 - -
Vvi2g230 729 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 7 726 - -
Vvi2g230 729 Gene3D Phosphorylase Kinase; domain 1 7 95 - -
Vvi2g230 729 MobiDBLite consensus disorder prediction 364 382 - -
Vvi2g230 729 Gene3D Transferase(Phosphotransferase) domain 1 99 331 - -
Vvi2g230 729 SUPERFAMILY Protein kinase-like (PK-like) 16 329 IPR011009 -
Vvi2g230 729 SMART serkin_6 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi2g230 729 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Vvi2g230 729 MobiDBLite consensus disorder prediction 362 388 - -
Vvi2g230 729 Pfam Protein kinase domain 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi2g230 729 MobiDBLite consensus disorder prediction 412 451 - -
Vvi2g230 729 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1-LIKE ISOFORM X1 7 726 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76534 PF00069 Pkinase 7.20E-61 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g230 - - vvi:100249628 1421.37