Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi2g230 | ATGGCCCGGACGGGGACTTCTCACAAAACCTACAGTGCGAATCCTAGCGATTACAAGCTCCTCGAAGAGGTCGGTTACGGCGCGAGCGCGACGGTGTACAGAGCGATCTATCTTCCTTTCAATGAAGTGGTGGCCGTTAAGTGTTTGGATCTCGATCGCTGCAATAGCAATCTGGATGACATACGTAGGGAGGCTCAAACAATGAGTTTGATTGACCATCCAAATGTAATAAAGGCATACTGTTCATTTGTTGTTGAAAGAAATCTTTGGGTGGTCATGCCGTTCATGGCAGAAGGCTCTTGCTTACACCTCATGAAGATAGCATATACGGATGGATTTGAAGAGTCAGCCATTGGTTCTATCCTGAAAGAGACTCTTAAAGCCTTGGAGTACCTCCATCGACATGGACATATCCATCGGGATGTTAAGGCTGGAAATATACTACTTGACAGTAATGGAGTGGTAAAACTTGCCGATTTTGGTGTTTCAGCATGCATGTTTGACAAAGGTGATAGACAACGTTCAAGAAATACTTTTGTAGGAACTCCATGCTGGATGGCACCCGAGGTTTTGCAACCAGGAAGTGGATATGATTTCAAGGCTGATATTTGGTCATTTGGCATAACAGCTCTGGAGCTGGCTCATGGTCATGCACCCTTTTCAAAATATCCCCCAATGAAGGTCCTTCTGATGACCATACAGAATGCTCCTCCTGGACTTGACTATGACCGTGATAAGAAGTTCTCTAAGTCTTTTAAAGAAATGGTTGCAATGTGCTTGGTGAAAGATCAAACAAAAAGGCCAACTGCTGAGAAGTTACTAAAACATTCCTTTTTCAAGCAAGCTAAGCCTCCAGAACTTTCTGTAAAGAAATTATTTGCTGAGTTGCCACCACTTTGGCAGCGTGTGAAAGCCCTTCAGCTTAAAGATGCTGCACAACTGGCTCTGAAAAAAATGCCTTCAGCAGAACAAGAGGCCATATCACAGAGTGAGTACAAGAGAGGTGTCAGTGCCTGGAATTTTGATATCGAGGATTTAAAAGTACAAGCATCATTGGTACAAGATGATGATGAAATACAAGAAATGAGGGAAGAAGATGAAAGCATGAAATCATTTGTTATTGATAAGGATTCATCTGATTCCAGATCTAGTTTGGGAAAATCAATCTCCACTAATGACAATTTTTTCAGAGGACGAATAACTGGTGATGAATTAGCACAGGCAGAGTGCTTGAGCAAAAAGGGAAAGAGTTTGAGAAGTGATTCACTCGAGTCTAGCAATCAAGAGAAAATTGGTCAGGAAAAGGATATATCAAGTGCTGAGATGATGCCATCAACCTCAGAGAAGGACATGGTCAATGCCAAGACTAAAACTCAGATGGTGAAAGGTCGCCAGACACAGAGTGGACCCCTGATGCCTGGTGTTGTGCTTAGTCATTCATTGTCAGACAGGGGGCGCTCCTTTGAAAGGTCCGAGAATGAAATTCAACCTATTACTGAGAAAGCTAACCGTGAAGTACGGCGAGCACCAAGCTTTAGTGGTCCATTGATGCTTCCGAATCGAGCTTCAGCAAACAGTTTATCTGCTCCAATAAAATCTTCAGCGGGATACAGAGATTCTTTGGAGGAGAAGTCAAAGGCCAATCTGGTGCAAATAAAAGGACGGTTCTCAGTAACATCTGAGAACGTAGATCTTGTAAAGGATATTCCATTATGTGCAGTTGCACGCCGATCCTCTCAGGGATCACCACTCAGGAAGTCTGCTAGTGTTGGTGATTGGATGTTTGATTCTAAACCAATGCTCACTACACCAAAGGACTTTAGCAACAGTAATGTACCCGCATCACTTCTCATGCCTCACCTTCAGAATCTTTTTCAGCAGACCTCACTTCAACAGGATCTCATTACGAATTTGTTGAATAGCTTGCAATCATCTGAGATAGTAGATGCTTCTCAAAATGGCAAATTGCCCCCGTTACCTCGTGGTTCAGAAAACAATGGAAATGTAGATCCAGGGGCTTCTGAAAGGGAGCGTTTGCTTCTCTTGAAAGTCTCTGAGCTTCAGGCTAGGATGATTAATTTAACTGACGAACTAACAGCAGAGAAGTTTAAATACATGCAACTGCAGCAGCAGCTAAATGCTGTGTCAGGTCAGGAAGAAGATGGGGACAAACGAGAAGGAGATGCTTGA | 2190 | 43.29 | MARTGTSHKTYSANPSDYKLLEEVGYGASATVYRAIYLPFNEVVAVKCLDLDRCNSNLDDIRREAQTMSLIDHPNVIKAYCSFVVERNLWVVMPFMAEGSCLHLMKIAYTDGFEESAIGSILKETLKALEYLHRHGHIHRDVKAGNILLDSNGVVKLADFGVSACMFDKGDRQRSRNTFVGTPCWMAPEVLQPGSGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKQAKPPELSVKKLFAELPPLWQRVKALQLKDAAQLALKKMPSAEQEAISQSEYKRGVSAWNFDIEDLKVQASLVQDDDEIQEMREEDESMKSFVIDKDSSDSRSSLGKSISTNDNFFRGRITGDELAQAECLSKKGKSLRSDSLESSNQEKIGQEKDISSAEMMPSTSEKDMVNAKTKTQMVKGRQTQSGPLMPGVVLSHSLSDRGRSFERSENEIQPITEKANREVRRAPSFSGPLMLPNRASANSLSAPIKSSAGYRDSLEEKSKANLVQIKGRFSVTSENVDLVKDIPLCAVARRSSQGSPLRKSASVGDWMFDSKPMLTTPKDFSNSNVPASLLMPHLQNLFQQTSLQQDLITNLLNSLQSSEIVDASQNGKLPPLPRGSENNGNVDPGASERERLLLLKVSELQARMINLTDELTAEKFKYMQLQQQLNAVSGQEEDGDKREGDA* | 730 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2150786 | 2160118 | - | Vvi2g230 | Vvi2g230 | 782929 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi2g230 | 729 | MobiDBLite | consensus disorder prediction | 651 | 672 | - | - | |
Vvi2g230 | 729 | ProSiteProfiles | Protein kinase domain profile. | 18 | 279 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi2g230 | 729 | CDD | STKc_OSR1_SPAK | 16 | 279 | - | - | |
Vvi2g230 | 729 | PANTHER | SERINE/THREONINE-PROTEIN KINASE FRAY2 | 7 | 726 | - | - | |
Vvi2g230 | 729 | Gene3D | Phosphorylase Kinase; domain 1 | 7 | 95 | - | - | |
Vvi2g230 | 729 | MobiDBLite | consensus disorder prediction | 364 | 382 | - | - | |
Vvi2g230 | 729 | Gene3D | Transferase(Phosphotransferase) domain 1 | 99 | 331 | - | - | |
Vvi2g230 | 729 | SUPERFAMILY | Protein kinase-like (PK-like) | 16 | 329 | IPR011009 | - | |
Vvi2g230 | 729 | SMART | serkin_6 | 18 | 279 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi2g230 | 729 | ProSitePatterns | Protein kinases ATP-binding region signature. | 24 | 47 | IPR017441 | GO:0005524 | |
Vvi2g230 | 729 | MobiDBLite | consensus disorder prediction | 362 | 388 | - | - | |
Vvi2g230 | 729 | Pfam | Protein kinase domain | 18 | 279 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi2g230 | 729 | MobiDBLite | consensus disorder prediction | 412 | 451 | - | - | |
Vvi2g230 | 729 | PANTHER | SERINE/THREONINE-PROTEIN KINASE BLUS1-LIKE ISOFORM X1 | 7 | 726 | - | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76534 | PF00069 | Pkinase | 7.20E-61 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi2g230 | - | - | vvi:100249628 | 1421.37 |