Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g238 ATGGGAACACAGGTTGAGAGCTTGTGGGTTTTGGCTCTTGCTGCCAAATGCAGAGCTTTCTCTTCTGAAACTGTCCTCGTTTTTGGGTTTGCGCTGTGTTTGGTTTGGTTTGCTGTGGTTTTGTCCCACTGGGCTTACCCGGGAGGCCAAGCTTGGGGGAGGTACTGGAGCAAGAGAGGAAGTAAAGCTGAGGCCATCATCCCAGGGCCGCGAGGGCTTCCAGTGGTGGGGAGCATGAGTCTCATGGTGAACCTCGCTCATCACAACCTCGCGGCTGCTGCCGAGCGGCTAGGAGCGATGAGGCTCATGGCGTTCAGCCTTGGCGAGACTCGAGCCATCGTTACGAGCAACCCAGACGTGGCGAAAGAGATTTTGAACAGCTCGGCGTTTGCGGATCGGCCAGTGAAGGAGTTTTACTGGCGAACCCTGCGGAGAATTGCCGCCACCCATCTCTTCTCTCCCAAACAAATCACTGCCTCGGAGACTCAGAGGTCCGAAATCGCTGCCCAGATGGTGTCACTCGTTGGCAGCTGTATTGGAGACATCCGCGTCCGCGATATTCTGAAGCGAGCTTCACTTCACCACATGATGTCCTCCGTATTCGGAAGCAAATACCGACTGGGTTCCTCAAATTCCGAAACGGATGAACTTAGTAGACTCGTCGAAGAAGGCTACGATCTCCTTGGCAAGCTCAACTGGTCCGACCACCTCCCTTGGCTTGCAGGGCTCGACCCTCAGAAAATCCGATTCAGATGCTCCAAACTCGTCCCCAGAGTGAATCGGTTCGTGAACCGGATCATCACTGAACATAGAGCTCAACCCGGCCCAACAACCCGAGATTTCGTCGATGTCCTACTCTCCCTTCAACAACCCGATAAGTTGTTGGATTCCGATATAATCGCCGTCTTATGGGAGATGATATTTCGGGGAACGGATACGGTGGCAGTTTTGATAGAGTGGATACTCGCAAGGATGGTACTCCACCCTGAGTGCCAATCAAGGGTCCACGATGAGCTGGATAGGGTGGTCGGAAAGTCACGGCCGGTGAAGGAATCCGACATTCCGGCGATGGTATACCTGGCGGCGGTCGTGAAGGAGGTTCTGAGGCTGCACCCACCGGGCCCACTGCTCTCGTGGGCCCGTTTATCAATCACAGATACCACGGTGGATGGCTATCACGTGCCTGCCGGGTCCACAGCGATGGTTAACATGTGGGCCATCACACGGGATCCACGAGTGTGGTCAGATCCACTCGACTTCACGCCCGACAGATTCGTGACCACCCCTGCTGACGTGGAATTCTCCTTGTTTGGATCCGATCTCAGGCTCGCTCCATTCGGGTCGGGCAGAAGAACCTGCCCCGGAAAGACCCTTGGCTTGACCACAGCCACCTTTTGGGTGGCGTCGCTGTTACATGAGTTCGAGTGGGTTCCATCCGACCCAAACCCGGTGGATCTATCCGAAGTGCTGAGGCTATCCTGCGAAATGGCACACCCTCTGACTGTGAGGGTGCGGCCCAGGCGAATATGA 1530 55.56 MGTQVESLWVLALAAKCRAFSSETVLVFGFALCLVWFAVVLSHWAYPGGQAWGRYWSKRGSKAEAIIPGPRGLPVVGSMSLMVNLAHHNLAAAAERLGAMRLMAFSLGETRAIVTSNPDVAKEILNSSAFADRPVKEFYWRTLRRIAATHLFSPKQITASETQRSEIAAQMVSLVGSCIGDIRVRDILKRASLHHMMSSVFGSKYRLGSSNSETDELSRLVEEGYDLLGKLNWSDHLPWLAGLDPQKIRFRCSKLVPRVNRFVNRIITEHRAQPGPTTRDFVDVLLSLQQPDKLLDSDIIAVLWEMIFRGTDTVAVLIEWILARMVLHPECQSRVHDELDRVVGKSRPVKESDIPAMVYLAAVVKEVLRLHPPGPLLSWARLSITDTTVDGYHVPAGSTAMVNMWAITRDPRVWSDPLDFTPDRFVTTPADVEFSLFGSDLRLAPFGSGRRTCPGKTLGLTTATFWVASLLHEFEWVPSDPNPVDLSEVLRLSCEMAHPLTVRVRPRRI* 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2231720 2233589 - Vvi2g238 Vvi2g238 782937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g238 509 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g238 509 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g238 509 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g238 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Vvi2g238 509 Pfam Cytochrome P450 68 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g238 509 Gene3D Cytochrome P450 54 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g238 509 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g238 509 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g238 509 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g238 509 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g238 509 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g238 509 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g238 509 PANTHER OS03G0134500 PROTEIN 1 508 - -
Vvi2g238 509 SUPERFAMILY Cytochrome P450 67 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g238 509 PANTHER CYTOCHROME P450 78A7-RELATED 1 508 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi2g238 Vvi15g642 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g238 K20619 - vvi:100258159 1002.28