Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g267 ATGGGAGAGAAGAAGCATGAGGATCCAGCAACCATAAAAAAATGCCACCATGAAATGCTGTCCACCTTGCTTGGAAGCAAAGAAGCTGCCAAGAGTTCAATTCTTTACAGTTACAAGCATGGATTTTCTGGCTTTGCAGCAAAGCTGACAGAATCTCAGGCAGAAGATATTGCAGGATTCCCAGGTGTTGTTCAAGTGATTCCAAATCGCATTCACAGGCTCCATACAACTAGAAGCTGGGATTTCCTCGGTCTCCAACATGATTATCCAACAAATGTTTTAACAGAGACCAACCTGGGTCGAGGAGTTATCATTGGGGTGATAGATTCAGGAGTCTGGCCAGAGTCTGAAAGCTTCAAGGATGAAGGCATGGGTCCAATTCCATCGCGTTGGAAAGGTATCTGCCAACACGGGGAGCGCTTCAATTCCACCAATTGCAACAGGAAACTTATTGGGGCTCGCTGGTTTTTTAAAGGGATCCACCAGGAAATAGGAAAATTCATGAATATAACTGACAACCTAGAATTTCTGTCACCAAGGGATGGAATTGGCCATGGCACTCATACAGCTTCAACAGCAGCAGGCTATTTTGTAGAGAAAGCAAACTACAGAGGACTAGCTACAGGCCTAGCCAGAGGAGGTGCACCTCTTGCTCGGTTAGCAATTTACAAGGCTTGCTGGGCCATTATCAGTGGAGCATGCAGTGATGCCGATATTCTGAAAGCATTTGACAAAGCCATACATGATGGGGTGGATATCCTATCTCTGTCTGTTGGCAATGATATTCCTCTATTCTCCTATGTTGATCAACGTGATTCAATTGCAATCGCTTCCTTCCATGCAATTGCAAAGGGGATAACGGTAGTTTGTTCAGCAGGAAATGATGGACCTTTCTCACAGACAATAGCAAACACTGCACCCTGGCTCATTACTGTGGCAGCCACCACCATTGACAGGGCCTTCCCAACAGCCATCATACTTGGGAACAACCAAACTTTCTTGGGTCAATCTATTGATACAGGAAAGCATAAACTTGGATTCACTGGTCTCACTTATTCAGAACGCGTAGCTTTAGACCCAAAGGACGATTCAGCAAAGGACTGTCAGCCTGGAAGCCTCAATGCAACATTAGCAGCAGGAAAAATTATCCTCTGTTTCTCAAAATCGGACAAACAGGATATAATTTCTGCATCAGGTGCAGTGCTGGAAGCAGGAGGCATTGGACTTATTTTTGCACAGTTCCCCACCAGTCAGCTTGAGTCATGTGATTTAATTCCTTGTATCAAAGTAAATTATGAAGTCGGGACACAGATACTTACTTACATCAGAAAAGCAAGGTCTCCTACTGCAAAGCTGAAATTTCCAAAGACTGTTACAGGGAAATGGGCATCTCCACATGTTGCATATTTCTCGTCCAGAGGACCCAGTTCCATGTCTCCTGCTGTGCTAAAGCCCGATGTTGCTGCCCCAGGAGTGAACATCTTAGCAGCTTATTCACCAGTTGATGCTGGAACTAGCAATGGGTTTGCCTTCTTATCAGGAACTTCAATGGCTTGTCCTCATGTGAGTGGATTAGCAGCACTCATTAAATCCGCCCATCCAACTTGGTCTCCTGCAGCCATAAGATCAGCTCTTGTCACTTCAGCTTCCCAAACTGGAACAGATGGCATGGATATAATTGAGGAGGGGCCGACTCGCAAGGCAGCAGACCCATTTGACATTGGTGGTGGCCATGTCAATCCCAACAAGGCACTAAAGCCAGGGCTCATTTACAATATCAGTATGGAGGACTACATCCAGTTCCTCTGCTCCATGGGTTACAGCAATCCATCCATTGGCAGGTTAACCAAGACCACGACAAATTGCACGAGAGGCAGCCATTTTCAATTAAACCTCAACCTCCCTTCCATCACCATTCCAAACCTCAAAAAGAAAGTAACAGTCATGAGAACTGTGACAAACGTGGGACACATTAATTCAGTGTATAAAGCTGAGGTGCAGGCTCCTTATGGCATTAAAATGGCAGTTGAACCTCATATACTGAGCTTCAACTTAACCACCCAATTTCTTCATTTCAAAGTTACCTTTTTCTCAACTCAGACGGTCCATGGAGACTACAAATTCGGAAGCCTAACATGGACAGATGGTGAGCATTTTGTCAGGAGTCCTATAGCCATACGTGCAATCAAATTTGACATGTATGCAGATGTATAA 2214 44.85 MGEKKHEDPATIKKCHHEMLSTLLGSKEAAKSSILYSYKHGFSGFAAKLTESQAEDIAGFPGVVQVIPNRIHRLHTTRSWDFLGLQHDYPTNVLTETNLGRGVIIGVIDSGVWPESESFKDEGMGPIPSRWKGICQHGERFNSTNCNRKLIGARWFFKGIHQEIGKFMNITDNLEFLSPRDGIGHGTHTASTAAGYFVEKANYRGLATGLARGGAPLARLAIYKACWAIISGACSDADILKAFDKAIHDGVDILSLSVGNDIPLFSYVDQRDSIAIASFHAIAKGITVVCSAGNDGPFSQTIANTAPWLITVAATTIDRAFPTAIILGNNQTFLGQSIDTGKHKLGFTGLTYSERVALDPKDDSAKDCQPGSLNATLAAGKIILCFSKSDKQDIISASGAVLEAGGIGLIFAQFPTSQLESCDLIPCIKVNYEVGTQILTYIRKARSPTAKLKFPKTVTGKWASPHVAYFSSRGPSSMSPAVLKPDVAAPGVNILAAYSPVDAGTSNGFAFLSGTSMACPHVSGLAALIKSAHPTWSPAAIRSALVTSASQTGTDGMDIIEEGPTRKAADPFDIGGGHVNPNKALKPGLIYNISMEDYIQFLCSMGYSNPSIGRLTKTTTNCTRGSHFQLNLNLPSITIPNLKKKVTVMRTVTNVGHINSVYKAEVQAPYGIKMAVEPHILSFNLTTQFLHFKVTFFSTQTVHGDYKFGSLTWTDGEHFVRSPIAIRAIKFDMYADV* 738
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2469922 2473615 + Vvi2g267 Vvi2g267 782966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g267 737 Gene3D Peptidase S8/S53 domain 102 598 IPR036852 GO:0004252|GO:0006508
Vvi2g267 737 PANTHER PEPTIDASE S8 1 736 - -
Vvi2g267 737 ProSiteProfiles Serine proteases, subtilase domain profile. 79 585 - -
Vvi2g267 737 Gene3D - 318 459 - -
Vvi2g267 737 Pfam Peptidase inhibitor I9 4 75 IPR010259 -
Vvi2g267 737 ProSitePatterns Serine proteases, subtilase family, serine active site. 514 524 IPR023828 -
Vvi2g267 737 Pfam Subtilase family 100 553 IPR000209 GO:0006508|GO:0008236
Vvi2g267 737 SUPERFAMILY Subtilisin-like 6 641 IPR036852 GO:0004252|GO:0006508
Vvi2g267 737 CDD PA_subtilisin_like 325 452 - -
Vvi2g267 737 Pfam Fibronectin type-III domain 631 726 IPR041469 -
Vvi2g267 737 CDD Peptidases_S8_3 72 550 IPR034197 -
Vvi2g267 737 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 75 IPR037045 -
Vvi2g267 737 Gene3D - 602 729 - -
Vvi2g267 737 PRINTS Subtilisin serine protease family (S8) signature 100 119 IPR015500 -
Vvi2g267 737 PRINTS Subtilisin serine protease family (S8) signature 181 194 IPR015500 -
Vvi2g267 737 PRINTS Subtilisin serine protease family (S8) signature 513 529 IPR015500 -
Vvi2g267 737 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.1-RELATED 1 736 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi2g267 Vvi16g965 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g267 - - vvi:100263381 1477.23