Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi2g269 | ATGAGTATCGTGCGCCCTCTGAGACCAGCGTCAAGAGGGTATCGCTACGCCATAATACAAAGCCTTTTTTTTCTTCAAGTTGGAATCCTCTACTCTGAACACGACTGCTTGAAGATGGAAGTTCAAAATCTTGAACATGGCAATATAATTGAAATTCATGGAGATGTGCCAACTGTAGAAACGAGCCTAAGCAGAAGTAAGATATGTGAGGGAGCAACATGTGGATTCTCAGATGCTAAAACAATTTCCAAGGATGACAAAGAGCGTGCAGCATCCATGAAGAAACTTTTGATAGCAGTTGTACTGTGTATCATTTTCATGAGTGTTGAAGTTGCTGGAGGTATTAAAGCCAACAGTCTTGCAATTTTAACGGATGCAGCTCATCTGTTGTCAGATGTTGCTGCCTTTGCTATCTCTTTGTTCTCGCTTTGGGCAGCAGGATGGGAAGCGACTCCACGTCAATCTTATGGTTTCTTCAGGATTGAGATACTTGGTGCACTGGTTTCCATCCAGATGATATGGCTTCTTGCTGGGATCCTCGTATATGAAGCTGTTGCAAGAATTATCCATGATACAGGTGAAGTCCAGGGCTTTCTTATGTTTATTGTTGCTGCCTTTGGTCTAGTTGTTAATGTTGTTATGGCTCTCCTTCTCGGTCATGATCATGCTCATGGGCATGGTGGACATGATCACGGGCATGGTGGGCACGATCATGGGCATGTGATGACCACCATCATGCTCATGAAGCTGCAAAAGACACAGCGGAATATCAATGTACAGGGGGCGTATCTTCATGTACTTGGGGATTCCATCCAGAGCATTGGTGTAATGATTGGTGGTGCAATCATCTGGTATAAACCTGAGTGGAAGATTATTGACCTGATATGCACTCTCATATTCTCAGCAATTGTTCTGGGCACAACAATCAGGATGCTGCGGAACATTCTGGAGGTTCTGATGGAGAGCACACCGAGAGAGATTGATGCAACAAGGCTTGAGAAAGGTCTCTATGCTTAG | 1017 | 44.25 | MSIVRPLRPASRGYRYAIIQSLFFLQVGILYSEHDCLKMEVQNLEHGNIIEIHGDVPTVETSLSRSKICEGATCGFSDAKTISKDDKERAASMKKLLIAVVLCIIFMSVEVAGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQMIWLLAGILVYEAVARIIHDTGEVQGFLMFIVAAFGLVVNVVMALLLGHDHAHGHGGHDHGHGGHDHGHVMTTIMLMKLQKTQRNINVQGAYLHVLGDSIQSIGVMIGGAIIWYKPEWKIIDLICTLIFSAIVLGTTIRMLRNILEVLMESTPREIDATRLEKGLYA* | 339 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2485419 | 2489802 | + | Vvi2g269 | Vvi2g269 | 782968 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi2g269 | 338 | Pfam | Cation efflux family | 96 | 320 | IPR002524 | GO:0006812|GO:0008324|GO:0016021|GO:0055085 | |
Vvi2g269 | 338 | Gene3D | Cation efflux protein transmembrane domain | 92 | 319 | IPR027469 | - | |
Vvi2g269 | 338 | SUPERFAMILY | Cation efflux protein transmembrane domain-like | 92 | 321 | IPR027469 | - | |
Vvi2g269 | 338 | PANTHER | METAL TOLERANCE PROTEIN A1 | 39 | 244 | - | - | |
Vvi2g269 | 338 | PANTHER | METAL TOLERANCE PROTEIN A1 | 250 | 337 | - | - | |
Vvi2g269 | 338 | TIGRFAM | CDF: cation diffusion facilitator family transporter | 93 | 335 | IPR002524 | GO:0006812|GO:0008324|GO:0016021|GO:0055085 | |
Vvi2g269 | 338 | PANTHER | CATION EFFLUX PROTEIN/ ZINC TRANSPORTER | 39 | 244 | - | - | |
Vvi2g269 | 338 | PANTHER | CATION EFFLUX PROTEIN/ ZINC TRANSPORTER | 250 | 337 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi2g269 | K14689 | - | cit:102623636 | 415.231 |