Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g270 ATGGAAAAAAGGCAGATGGTATCATCAACCGAGGAAGAGGAAGACAGCCACCGCGAGTATGCTATGCAATTGGTAAGCGCATCTGTACTGCCTATGGTGTTGAAAGCAGCCTTGGAGCTGGGTGTGCTGGACATCATAGGGAGGGCTGGACCAGGGGCACTTCTCTCCCCTTCAGAGATCGCATCCCACATCCCCACCCACAACCCTGATGCCCCTTTTGCACTTGATCGCATCCTCCGCCTTTTGGCTAGCCATTCCATTCTTACTTACTCTCTTGACACCCACCGTGATGGCAAGGTCCATAGGCTCTATGGTTTAGCACCCGTGGCCAAATACTTCGTCCCAAACCAAGATGGAGTTTCGCTGGCTATTTACCTACGAACCATTCAGGACAAGGTCACAGTGGATATCTGGCACCATCTTAAAGATGCAGTTCTGGAAGGGGGACTGCCATTTAAAAGATCCTACGGAATGGATGCCATTGATTATGTGGGGAAGGATGCCAGGTTCTTCGAGATGCTCAAGGCCTCCAACAGGGACTACATCCCAATGTTCATGAACAAAATCCTGGAAACTTACAAAGGTTTTGAAGGTCTAAAATCATTGGTGGACGTGGCTGGAGGCAACGGCAGTGTCCTCAATTTCATCGTTTCCAGGTATCCTTCCATCAAGGGTATCAACTTCGATTTGGCCCCTGTTATAGAGAAGTTGCCCTCTTACCCTGGCATTGAGCATGTTGCAGGGGATATGTTCACAAGCGTTCCAAAAGGAGATGCCATCTTCATGAAGAATATACTTCACAGTTGGAGTGATGAGCACTGCGTGAAGCTACTAAGGAATTGCTACCATGCATTACCAGACAATGGAAAAGTCATTGTGGTGGATGCGGTGATCCCAGATGCCCCCGAACCAAGCGCTCAGGTGAAAAGCACATATCAGCTTGATTTGTTTATGATGAATTTGAACCCTGATGGGAAGGAGAGGACAGAAAAAGAATTTGCAGAATTAGCAAAAGAAGCTGGATTTTTCAGTACCAAAGTGGCCGGCTGTGCTTATAGTTTCTCACTGGTGGAATTCCATAAAAAGATGTAG 1092 47.53 MEKRQMVSSTEEEEDSHREYAMQLVSASVLPMVLKAALELGVLDIIGRAGPGALLSPSEIASHIPTHNPDAPFALDRILRLLASHSILTYSLDTHRDGKVHRLYGLAPVAKYFVPNQDGVSLAIYLRTIQDKVTVDIWHHLKDAVLEGGLPFKRSYGMDAIDYVGKDARFFEMLKASNRDYIPMFMNKILETYKGFEGLKSLVDVAGGNGSVLNFIVSRYPSIKGINFDLAPVIEKLPSYPGIEHVAGDMFTSVPKGDAIFMKNILHSWSDEHCVKLLRNCYHALPDNGKVIVVDAVIPDAPEPSAQVKSTYQLDLFMMNLNPDGKERTEKEFAELAKEAGFFSTKVAGCAYSFSLVEFHKKM* 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2496155 2498001 - Vvi2g270 Vvi2g270 782969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g270 363 Pfam O-methyltransferase domain 138 342 IPR001077 GO:0008171
Vvi2g270 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 359 IPR029063 -
Vvi2g270 363 Gene3D - 1 113 IPR036388 -
Vvi2g270 363 Gene3D Vaccinia Virus protein VP39 115 361 IPR029063 -
Vvi2g270 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 361 IPR016461 GO:0008168
Vvi2g270 363 PANTHER CAFFEIC ACID 3-O-METHYLTRANSFERASE 1-LIKE 17 362 - -
Vvi2g270 363 PIRSF O-mtase 1 362 IPR016461 GO:0008168
Vvi2g270 363 SUPERFAMILY Winged helix DNA-binding domain 12 116 IPR036390 -
Vvi2g270 363 Pfam Dimerisation domain 32 83 IPR012967 GO:0046983
Vvi2g270 363 PANTHER O-METHYLTRANSFERASE 17 362 IPR016461 GO:0008168
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi2g270 Vvi15g603 ECH
Vvi2g270 Vvi15g606 ECH
Vvi2g270 Vvi16g956 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g270 K13066 - vvi:100232921 728.783