Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g271 ATGTGGGGAAGGATGCCAGGCTTTGCGAGTGGTTTTGAAGGTCTAAAACCACTGGTGGATGTGGGTGGAGGCAATGGTAGTATCCTCAATGTGATCGTTTCCAAGTATCCTTCCATTAAAGGTATTAACTTCGATTTGGCCCCAGTTATAGAAAAGTCACCCTCTTATCCTGGCGTTGAGCATGTTGCAGGAGATATGTTCACAAGCGTTCCAAATGGAGATGCTATCTTCATGAAGTGGATACTCCACAGTTGA 255 45.1 MWGRMPGFASGFEGLKPLVDVGGGNGSILNVIVSKYPSIKGINFDLAPVIEKSPSYPGVEHVAGDMFTSVPNGDAIFMKWILHS* 85
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2501637 2512150 - Vvi2g271 Vvi2g271 782970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g271 84 PANTHER O-METHYLTRANSFERASE 10 84 IPR016461 GO:0008168
Vvi2g271 84 Gene3D Vaccinia Virus protein VP39 8 83 IPR029063 -
Vvi2g271 84 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 84 IPR016461 GO:0008168
Vvi2g271 84 PANTHER CAFFEIC ACID 3-O-METHYLTRANSFERASE 1-LIKE 10 84 - -
Vvi2g271 84 Pfam O-methyltransferase domain 11 83 IPR001077 GO:0008171
Vvi2g271 84 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 9 83 IPR029063 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi2g271 Vvi15g605 ECH
Vvi2g271 Vvi16g955 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g271 K13066 - vvi:100232921 135.191