Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g286 ATGACTTCTGAAAGTGCAGATGACAACTGCTTAGCATGGGCGGCAAGAGATCCATCTGGCCTTCTATCACCTTACAAATTCAGCCGCAGGGCTCTTGGAAGTGATGATGTTTCATTGAATATCACACACTGTGGGGTTTGTTATGCTGATGTAGTCTGGACTAGGAATAAATTTGGAGACTCTAAGTATCCTGTGGTACCTGGACATGAGATTGCTGGAATTGTAAAAGAGGTTGGCTCAAATGTTCGTCGCTTCAAAGTTGGTGACCATGTTGGAGTGGGAACCTATGTCAACTCATGCAGGGATTGTGAGTACTGCAATGATGGACTTGAAGTTCATTGTGCGAGGGGGTCGGTGTTCACTTTTAATGGTGTTGATGTTGATGGTACGGTCACCAAAGGAGGTTATTCCAGTCACATTGTTGTTCATGAAAGGTACTGCTTCAAGATACCTGACAACTACCCATTAGCTTCAGCAGCACCTTTGCTATGTGCTGGAATTACTGTTTACACTCCCATGATGCGCCACAAGATGAACCAACCTGGTAAATCCCTCGGGGTGATTGGGCTAGGTGGTCTTGGTCACTTGGCTGTGAAGTTTGGCAAGGCTTTTGGATTGCGTGTCACAGTTCTCAGCACAAGCATATCCAAGAAAGAAGAAGCTCTGAATCTGCTTGGAGCAGACAAATTTGTGGTCTCATCAGACGAACAGCAGATGATGGCTCTTTCTAGATCACTCGACTTTATAATTGATACTGCATCAGGTGATCACCCATTCGATCCATACTTGTCTCTGTTGAAGACTGCCGGAGTCCTAGTTCTGGTGGGGTTCCCAAGTGAAGTGAAATTCAGTCCTGGAAGCATTGTCATGGGTATGAGAACTGTTTCTGGTAGCGCTACAGGTGGTACAAAAGATACACAAGAAATGCTTGACTTTTGTGCTGCACATGGAATTCACCCAGAGATCGAAGTAATTCCAATTCAGTATGCAAATGAAGCCCTTGAGAGGCTAATAAAGAAGGACGTGAAGTACCGTTTTGTGATTGATATTGAAAACTCTCTGAAGTGA 1068 44.57 MTSESADDNCLAWAARDPSGLLSPYKFSRRALGSDDVSLNITHCGVCYADVVWTRNKFGDSKYPVVPGHEIAGIVKEVGSNVRRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARGSVFTFNGVDVDGTVTKGGYSSHIVVHERYCFKIPDNYPLASAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHLAVKFGKAFGLRVTVLSTSISKKEEALNLLGADKFVVSSDEQQMMALSRSLDFIIDTASGDHPFDPYLSLLKTAGVLVLVGFPSEVKFSPGSIVMGMRTVSGSATGGTKDTQEMLDFCAAHGIHPEIEVIPIQYANEALERLIKKDVKYRFVIDIENSLK* 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2634297 2636865 + Vvi2g286 Vvi2g286 782985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g286 355 SUPERFAMILY GroES-like 14 183 IPR011032 -
Vvi2g286 355 CDD CAD1 12 349 - -
Vvi2g286 355 Gene3D - 13 350 - -
Vvi2g286 355 PANTHER ALDEHYDE REDUCTASE 7 354 - -
Vvi2g286 355 PANTHER - 7 354 - -
Vvi2g286 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
Vvi2g286 355 Pfam Alcohol dehydrogenase GroES-like domain 35 150 IPR013154 -
Vvi2g286 355 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491
Vvi2g286 355 Gene3D - 165 320 - -
Vvi2g286 355 Pfam Zinc-binding dehydrogenase 192 314 IPR013149 -
Vvi2g286 355 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g286 K00083 - vvi:100244482 703.36