Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g29 ATGGCGACAGGAATTTCGGCTTCTTTAAACTCCATGTCGTGCCGTTTGGGCCGGAATAGTTTCACAGCCACCGGACCCAGCTCGGTGATAAGTTTGTCGTCTTTCTTAACTCCGGTGACCCACTTGAAGGGGAATATTTTTCCTCTGCAGAGAAGGAGGAGCTTGAAGGTGTGCTTGGTCCTGGAGAAGAAAATTGAAGATGGTATTGAAATTGAGGACGACAGTCCGGAAAGCTCGAACAGGGCCTCTGAGAGACTAGCGAGGAAGAAAGCGGAAAGATACACTTATCTTGTTGCTGCTATGATGTCTAGCCTCGGCATCACTTCAATGGCTATCGTTGCTGTCTACTACAGATTTTCTTGGCAAATGGAGGGTGGAGAAATCCCAGTTCTGGAAATGTTGGGTACATTTGCTCTTTCTGTGGGAGCTGCTGTGGGGATGGAGTTTTGGGCGCGGTGGGCTCACAAAGCGCTCTGGCATGCTTCACTGTGGCATATGCACGAGTCTCACCATCGACCCAGAGAAGGTCCTTTCGAGCTCAACGATGTGTTTGCCATCATCAATGCCGTCCCGGCAATATCTCTGCTCTCCTATGGCCTCTTCAACAAAGGCCTCGTCCCAGGTCTCTGTTTCGGAGCTGGACTAGGAATAACAGTGTTTGGCATGGCCTACATGTTTGTCCACGACGGCCTTGTCCACCGTCGATTCCCTGTCGGACCCATCGCCAACGTCCCTTATCTACGAAAAGTAGCTTCGGCCCACCAACTTCATCACTCTGACAAATTTAATGGAGTTCCATACGGGCTGTTCTTGGGACCCATGGAGCTGGAAGAGGTGGGAGGCATGGAAGAGTTGGAAAAGGAGATCAATAGAAGAATTAAATCATCTGACTCTTCATGA 900 49.89 MATGISASLNSMSCRLGRNSFTATGPSSVISLSSFLTPVTHLKGNIFPLQRRRSLKVCLVLEKKIEDGIEIEDDSPESSNRASERLARKKAERYTYLVAAMMSSLGITSMAIVAVYYRFSWQMEGGEIPVLEMLGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAISLLSYGLFNKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPIANVPYLRKVASAHQLHHSDKFNGVPYGLFLGPMELEEVGGMEELEKEINRRIKSSDSS* 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 359999 362037 - Vvi2g29 Vvi2g29 782728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g29 299 PANTHER BETA-CAROTENE HYDROXYLASE 2 298 - -
Vvi2g29 299 Pfam Fatty acid hydroxylase 143 271 IPR006694 GO:0005506|GO:0008610|GO:0016491
Vvi2g29 299 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 2 298 IPR045019 GO:0016491
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi2g29 Vvi16g754 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g29 K15746 - vvi:100232875 570.466