Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi2g305 | ATGGCTAAATCAAAGTGTATTAAGTTTCTAAGTGATGGTTATAGATATCACCAGGTATATATATACACAAGGAGAGAGAGAGAAAGTCATGAAAAATTCAACCATGGTCTGGCCCCCCATATTGATTGCTCCTCCTTCCCCTATTCTTCTGTAAATAACTCTTTATATATATGCATCTCTTCTCTCCTCATCCCTCACACCCTTCTTCTCCTTCTCCAGCTTCTTCGTCTTCTGCGTTTTTCCTCCCACGTTCCAGGGAAAAGTTTCAGTTTTTCTCTCTCTTGTCTTTCTCGTGCCAGCACACTGTTGGGCTCGATCTCAACTGTTTGCAGAAGAACATTTCATCTGGGTTTTCTCAGTGGAGCACCCCATTTTGGTTTTGGGTTTGGAAGCTACCCATGCCTTAGAAGGTCGATAATTACGGCTTATTTAATATGGTTCAGATCAATCACACGGTCTCTGAAGGGTCCACGTGTCTGGCCGGTAGTAGGTAGTCTCCCGCTCCTTATTCAGAACGCCAATCGCATGCACGAGTGGATCGCCGAGAACCTCCGCTCATGCGGCGGCACGTACCAGACCTGCATTTGCCCAATTCCGTTTTTAGCCCGGAAGCAGGGTCTCGTGACCGTCACGTGTGACCCGAAGAATCTGGAGCATATTCTCAAGATCCGGTTCGATAATTACCCCAAGGGTCCGACATGGCAGGCAGTGTTCCATGACCTGCTCGGTGAGGGGATCTTCAATTCTGATGGCGAAACGTGGCGGTTCCAGCGTAAGACCGCCGCACTGGAATTCACCACCCGGACTCTGCGCCAAGCCATGGCTCGCTGGGTCACCCGCGCCATTAAGCTGAGGTTTTGCCCGATACTGAAGAAGGCTCAACTCGAGGGCAAGCCGGTTGATCTCCAAGATCTGCTGCTTCGGCTCACTTTTGACAACATCTGCGGCTTGGCTTTTGGGAAGGACCCGCAGACGCTGGCTCCGGGGCTCCCCGAGAACAGTTTCGCTACGGCTTTCGACCGAGCCACGGAAGCCACCCTGCAGCGCTTTATTCTGCCTGACACACGCAAGCTCGAGTTGGTGAGTCAGCAGCAAGGTGGGTCCCCTCACGATGACCTCCTCTCACGGTTCATGAAGAAAAAGGAAGCCTACTCTGACAATTTCCTCCAACACGTGGCGCTCAACTTCATCCTAGCTGGACGTGACACGTCATCAGTAGCTCTGAGCTGGTTCTTCTGGTTGGTCATTCAAAACCCAAGGGCAGCGTTATCTGAAACCCTTAGGCTATACCCCTCAGTTCCAGAAGACTCAAAGCATGTAGTCGTCGACGACGTCCTGCCCGACGGCACATTCGTTCCGGCAGGATCGGCAATCACCTATTCCATATACTCGACCGGACGAATGAAGTTCATCTGGGGCGAAGACTGCCTAGAATTCCGGCCAGAAAGATGGTTATCAGCAGATGGTAAAAAAATTGAGCTACAAGATTCTTTCAAATTTGTCGCCTTCAATGCAGGTCCAAGGATTTGCCTCGGCAAGGACTTAGCTTATCTACAAATGAAGTCCATAGCAGCGGCGGTTTTGCTCCGCCACCGCCTCACGGTGGCACCGGGGCACAGGGTGGAGCAGAAAATGTCACTGACATTGTTCATGAAGTATGGCCTCAAAGTGAACGTGCAACCTAGAGACTTGACCCCAATTTTAGCCAACATTCCCAAGGCCAAACCCAACACTAAGGTCAATGATTATATAATTTTCCACCGCAGTATTAGGAGAGCCACAATGGACAAAACGGCAATTGCCCTTGAAGCTATCAGCAGGGGAATTGTTGATCTGGAAAACATCCCTCTTGAAGAAGTTTTCGAGAAATTAAAATGTGCACGAGAAGGTCTTAGTTTAGATGAGGTTGACAAGCGATTGACTGTGTTTGGGTACAACAGACTTGAAGAGAAAAAGGAAAATAAAATTCTGAAATTTCTGGGATTTATGTGGAATCCTCTCTCATGGGTTATGGAAGCAGCAGCAATCATGGCCATTTCTGTTGCAGATTTAGGGAATGAGGCTGTAGGTTACCATGACGTTTTTGGCATTCTGTTTCTGCTTCTTGTCGATTCAGGCATCAGCTTTGTATTTGAAAGCTATGATGACAATGAAGTGGTGGCCCTTATGGCTAGGCTGGCTCCAAAAGCAAAGGTTTTACGAGATGGCAAATGGATTGAGGAACATGCTTCTGTGTTGGTTCCTGGAGACATTATCAGTATCAAACTGGGAGATATCATCCCTGCTGATGCATGTTTACTTGAAGGAGATCCTCTGAAAATTGATCAGTCTGCTCTCACAGGAGAGTCATTCCCATTAACAAAACATACTGGTGAGGGAGTTTACTCTGGTTCAACATGTATGCAAGGTGAAACTGAAGCAGTGGTTACTGCAACTGGAGTGCATACTTTCTTTGGAAAGGCAGCTCATCTTGTGGAAACAAGTACACATGTTGGGCATTATCAGCAGGTTTTAACAGTAATTGGAAACTTTTGCATTTGCTCAATTGCCATCGGAATGTTGATTGAGATCATCATAATATACTGGGTCCAACACAGACACTATCATTCCGGAATAGGCAACCTGGTTGTCCTACTCATTGGCGGTATCCCAATTGCAATTCCAGCAGTTGTGTCTCTTATCATGTCCGTGGGTTTTCGTCACCTAACTCAGCAGGGTGTTATAACTAAGAGAATGGCAGCTATTGAGGACATGGCTGGGATGGATGTCCTCTGCAGTAATAAGACAGGAACTTTAACTCTTAACAAACTTACAATAGACAAGAATATGATCGAGGTTTTTGCCAAAGGTTTTGACCAGGAAATGGTTGTATTGATGGCTGCAAGAGCTTCAAGATTGGAGAATCAAGATGCTATTGATGCTGCAATTGTTTCAATGCTGGCTGATCCTAAGGAGGCACGAGCAGGAATTACAGAAGTTCACTTCCTTCCATTCAATCCAACTGATAAGAAGACAGCTCTTACATACATTAACAGTGCTGGTAAAATGCACAGGGCTAGCAAGGGTGCGCCAGAGCAGATTCTCAATCTGGCACATAACAAATCAGATATTGAAAGAAGAGTGCAATCAATAATCGATAAATTTGCAGAGCGTGGGATTGGATCCCTTGCAGTTGCATGTCAGGAAGTACCTGCTGGCACTGAAGACAGTCCTGGTGGGCCCTGGGAATTTGTTGGTCTTCTCCCACTCTTTGACCCACCTCGCCATGACAGTGCTGAAGCAATGAGAAGAGCTCTAGATCTCGGAGTAAGTGTTAAGATGATAACAGGTGACCAATTGGCCATTGCTAAGGAGACTGGGAGATGGCATGGAATGGGCACAAACATGTACCCTTCATCATCTTTGCTTGGAAATGACAAGGACCAGTCTATTGCAACCTTACCAGTTGATGAACTTATTGAAAAAGCTGATGGCTTTTCTGGTGTCTTTCCTGAACATAAGTATAAGATTGTGATGCGATTACAATCAAGAAAGCACATCGTTGGGATGACAGGAAATGGAGTCACTGATGCACCTGCAATTAAGAAAGCAGACATAGGAATTGCTGCGGCAGATTCAACAGATGCTGCTCGAGGCACTTGTGACATAGTACTGACAGAGCCTGGGCTAAGTGTAATCATTAGTGCTGTATTAACCAGCCGCTCAATCTTTCAAAGAATGAAGAACGTCATGACATATGCAGTATCTATCACAGTGCGTATGGTTCTAGGTTTTCTGGTGCTGACTGCATTCTGGAAGTTCGATTTCCCTCTTTACATGGTTCTTATGATTGCCATTCTTAATCATACTATTATGATTGCTACAGACGATGACAGGGTGAAGCCATCTCCAGTTCCTGACAGTTGGAAGCTTAGTGAAATTTTTGTGACTGGGATTGTCACAGGAACTTACCTTGCCCTGATGACAGTTGTATTCTTCTGGGCAGCTTATGAAACCAGTTTCTTTGCGAAGAACTTCCACGTAACAAACTTCAACAAGCATCAGTACAATCTCTCAGATGAGAAAACCTTAGACCATCTGCATGCACAGTTGGCATCTGCAGTGTACCTTCAAGTTAACACCATCAGCCAGGCTTTAATATTTGTGACTCGCTCCAGGGGCTGGTCGTTCATGCAAAGAGAAAGACCTCGTCTTCGTCTTGTTTCTGCCTTTGTCAGCATTCAATTGGCGGCAACAGTGATATCTGCCACAGCATCCTTGGAATTTGCTGGGATTAAAAAGATTGGTTGGGGTTGGACTGGTGTTATTTGGCTATACAACATTCTAACCTATATGTTGCTTGATCCTATCAAATTTGGTGTGCAATATGCTCTTAGTGGGAGAGCTTAG | 4389 | 45.98 | MAKSKCIKFLSDGYRYHQVYIYTRRERESHEKFNHGLAPHIDCSSFPYSSVNNSLYICISSLLIPHTLLLLLQLLRLLRFSSHVPGKSFSFSLSCLSRASTLLGSISTVCRRTFHLGFLSGAPHFGFGFGSYPCLRRSIITAYLIWFRSITRSLKGPRVWPVVGSLPLLIQNANRMHEWIAENLRSCGGTYQTCICPIPFLARKQGLVTVTCDPKNLEHILKIRFDNYPKGPTWQAVFHDLLGEGIFNSDGETWRFQRKTAALEFTTRTLRQAMARWVTRAIKLRFCPILKKAQLEGKPVDLQDLLLRLTFDNICGLAFGKDPQTLAPGLPENSFATAFDRATEATLQRFILPDTRKLELVSQQQGGSPHDDLLSRFMKKKEAYSDNFLQHVALNFILAGRDTSSVALSWFFWLVIQNPRAALSETLRLYPSVPEDSKHVVVDDVLPDGTFVPAGSAITYSIYSTGRMKFIWGEDCLEFRPERWLSADGKKIELQDSFKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLTVAPGHRVEQKMSLTLFMKYGLKVNVQPRDLTPILANIPKAKPNTKVNDYIIFHRSIRRATMDKTAIALEAISRGIVDLENIPLEEVFEKLKCAREGLSLDEVDKRLTVFGYNRLEEKKENKILKFLGFMWNPLSWVMEAAAIMAISVADLGNEAVGYHDVFGILFLLLVDSGISFVFESYDDNEVVALMARLAPKAKVLRDGKWIEEHASVLVPGDIISIKLGDIIPADACLLEGDPLKIDQSALTGESFPLTKHTGEGVYSGSTCMQGETEAVVTATGVHTFFGKAAHLVETSTHVGHYQQVLTVIGNFCICSIAIGMLIEIIIIYWVQHRHYHSGIGNLVVLLIGGIPIAIPAVVSLIMSVGFRHLTQQGVITKRMAAIEDMAGMDVLCSNKTGTLTLNKLTIDKNMIEVFAKGFDQEMVVLMAARASRLENQDAIDAAIVSMLADPKEARAGITEVHFLPFNPTDKKTALTYINSAGKMHRASKGAPEQILNLAHNKSDIERRVQSIIDKFAERGIGSLAVACQEVPAGTEDSPGGPWEFVGLLPLFDPPRHDSAEAMRRALDLGVSVKMITGDQLAIAKETGRWHGMGTNMYPSSSLLGNDKDQSIATLPVDELIEKADGFSGVFPEHKYKIVMRLQSRKHIVGMTGNGVTDAPAIKKADIGIAAADSTDAARGTCDIVLTEPGLSVIISAVLTSRSIFQRMKNVMTYAVSITVRMVLGFLVLTAFWKFDFPLYMVLMIAILNHTIMIATDDDRVKPSPVPDSWKLSEIFVTGIVTGTYLALMTVVFFWAAYETSFFAKNFHVTNFNKHQYNLSDEKTLDHLHAQLASAVYLQVNTISQALIFVTRSRGWSFMQRERPRLRLVSAFVSIQLAATVISATASLEFAGIKKIGWGWTGVIWLYNILTYMLLDPIKFGVQYALSGRA* | 1463 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2828669 | 2842078 | + | Vvi2g305 | Vvi2g305 | 783004 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi2g305 | 1462 | Pfam | E1-E2 ATPase | 726 | 904 | - | - | |
Vvi2g305 | 1462 | Gene3D | - | 728 | 812 | - | - | |
Vvi2g305 | 1462 | SMART | Cation_ATPase_N_a_2 | 611 | 683 | IPR004014 | - | |
Vvi2g305 | 1462 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 597 | 1462 | - | - | |
Vvi2g305 | 1462 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 503 | 512 | IPR017972 | GO:0005506|GO:0016705 | |
Vvi2g305 | 1462 | SUPERFAMILY | HAD-like | 921 | 1231 | IPR036412 | - | |
Vvi2g305 | 1462 | Pfam | Cation transporter/ATPase, N-terminus | 614 | 677 | IPR004014 | - | |
Vvi2g305 | 1462 | Gene3D | Cytochrome P450 | 149 | 562 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi2g305 | 1462 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 611 | 1456 | IPR023298 | - | |
Vvi2g305 | 1462 | SUPERFAMILY | Cytochrome P450 | 146 | 562 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi2g305 | 1462 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 697 | 944 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi2g305 | 1462 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 1159 | 1263 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi2g305 | 1462 | PRINTS | H+-transporting ATPase (proton pump) signature | 1041 | 1059 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi2g305 | 1462 | PRINTS | H+-transporting ATPase (proton pump) signature | 1156 | 1172 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi2g305 | 1462 | PRINTS | H+-transporting ATPase (proton pump) signature | 1184 | 1200 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi2g305 | 1462 | PRINTS | H+-transporting ATPase (proton pump) signature | 1215 | 1240 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi2g305 | 1462 | PRINTS | H+-transporting ATPase (proton pump) signature | 1369 | 1390 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi2g305 | 1462 | Gene3D | - | 922 | 1221 | IPR023214 | - | |
Vvi2g305 | 1462 | PANTHER | PLASMA MEMBRANE ATPASE | 597 | 1462 | - | - | |
Vvi2g305 | 1462 | Gene3D | - | 937 | 1084 | IPR023299 | GO:0000166 | |
Vvi2g305 | 1462 | Pfam | haloacid dehalogenase-like hydrolase | 923 | 1198 | - | - | |
Vvi2g305 | 1462 | Gene3D | - | 691 | 1426 | - | - | |
Vvi2g305 | 1462 | SUPERFAMILY | Calcium ATPase, transduction domain A | 728 | 825 | IPR008250 | - | |
Vvi2g305 | 1462 | TIGRFAM | ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase | 630 | 1416 | IPR006534 | GO:0008553|GO:0016021|GO:0120029 | |
Vvi2g305 | 1462 | Pfam | Cytochrome P450 | 155 | 324 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi2g305 | 1462 | Pfam | Cytochrome P450 | 421 | 549 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi2g305 | 1462 | Pfam | Cytochrome P450 | 367 | 420 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vvi2g305 | 1462 | CDD | P-type_ATPase_H | 630 | 1452 | IPR006534 | GO:0008553|GO:0016021|GO:0120029 | |
Vvi2g305 | 1462 | PRINTS | P-type cation-transporting ATPase superfamily signature | 775 | 789 | - | - | |
Vvi2g305 | 1462 | PRINTS | P-type cation-transporting ATPase superfamily signature | 925 | 939 | - | - | |
Vvi2g305 | 1462 | PRINTS | P-type cation-transporting ATPase superfamily signature | 1079 | 1090 | - | - | |
Vvi2g305 | 1462 | PRINTS | P-type cation-transporting ATPase superfamily signature | 1101 | 1111 | - | - | |
Vvi2g305 | 1462 | PRINTS | P-type cation-transporting ATPase superfamily signature | 1184 | 1203 | - | - | |
Vvi2g305 | 1462 | PRINTS | P-type cation-transporting ATPase superfamily signature | 1207 | 1219 | - | - |
Event-related genes

Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi2g305 | K01535 | - | vvi:100246127 | 1701.8 |