Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g305 ATGGCTAAATCAAAGTGTATTAAGTTTCTAAGTGATGGTTATAGATATCACCAGGTATATATATACACAAGGAGAGAGAGAGAAAGTCATGAAAAATTCAACCATGGTCTGGCCCCCCATATTGATTGCTCCTCCTTCCCCTATTCTTCTGTAAATAACTCTTTATATATATGCATCTCTTCTCTCCTCATCCCTCACACCCTTCTTCTCCTTCTCCAGCTTCTTCGTCTTCTGCGTTTTTCCTCCCACGTTCCAGGGAAAAGTTTCAGTTTTTCTCTCTCTTGTCTTTCTCGTGCCAGCACACTGTTGGGCTCGATCTCAACTGTTTGCAGAAGAACATTTCATCTGGGTTTTCTCAGTGGAGCACCCCATTTTGGTTTTGGGTTTGGAAGCTACCCATGCCTTAGAAGGTCGATAATTACGGCTTATTTAATATGGTTCAGATCAATCACACGGTCTCTGAAGGGTCCACGTGTCTGGCCGGTAGTAGGTAGTCTCCCGCTCCTTATTCAGAACGCCAATCGCATGCACGAGTGGATCGCCGAGAACCTCCGCTCATGCGGCGGCACGTACCAGACCTGCATTTGCCCAATTCCGTTTTTAGCCCGGAAGCAGGGTCTCGTGACCGTCACGTGTGACCCGAAGAATCTGGAGCATATTCTCAAGATCCGGTTCGATAATTACCCCAAGGGTCCGACATGGCAGGCAGTGTTCCATGACCTGCTCGGTGAGGGGATCTTCAATTCTGATGGCGAAACGTGGCGGTTCCAGCGTAAGACCGCCGCACTGGAATTCACCACCCGGACTCTGCGCCAAGCCATGGCTCGCTGGGTCACCCGCGCCATTAAGCTGAGGTTTTGCCCGATACTGAAGAAGGCTCAACTCGAGGGCAAGCCGGTTGATCTCCAAGATCTGCTGCTTCGGCTCACTTTTGACAACATCTGCGGCTTGGCTTTTGGGAAGGACCCGCAGACGCTGGCTCCGGGGCTCCCCGAGAACAGTTTCGCTACGGCTTTCGACCGAGCCACGGAAGCCACCCTGCAGCGCTTTATTCTGCCTGACACACGCAAGCTCGAGTTGGTGAGTCAGCAGCAAGGTGGGTCCCCTCACGATGACCTCCTCTCACGGTTCATGAAGAAAAAGGAAGCCTACTCTGACAATTTCCTCCAACACGTGGCGCTCAACTTCATCCTAGCTGGACGTGACACGTCATCAGTAGCTCTGAGCTGGTTCTTCTGGTTGGTCATTCAAAACCCAAGGGCAGCGTTATCTGAAACCCTTAGGCTATACCCCTCAGTTCCAGAAGACTCAAAGCATGTAGTCGTCGACGACGTCCTGCCCGACGGCACATTCGTTCCGGCAGGATCGGCAATCACCTATTCCATATACTCGACCGGACGAATGAAGTTCATCTGGGGCGAAGACTGCCTAGAATTCCGGCCAGAAAGATGGTTATCAGCAGATGGTAAAAAAATTGAGCTACAAGATTCTTTCAAATTTGTCGCCTTCAATGCAGGTCCAAGGATTTGCCTCGGCAAGGACTTAGCTTATCTACAAATGAAGTCCATAGCAGCGGCGGTTTTGCTCCGCCACCGCCTCACGGTGGCACCGGGGCACAGGGTGGAGCAGAAAATGTCACTGACATTGTTCATGAAGTATGGCCTCAAAGTGAACGTGCAACCTAGAGACTTGACCCCAATTTTAGCCAACATTCCCAAGGCCAAACCCAACACTAAGGTCAATGATTATATAATTTTCCACCGCAGTATTAGGAGAGCCACAATGGACAAAACGGCAATTGCCCTTGAAGCTATCAGCAGGGGAATTGTTGATCTGGAAAACATCCCTCTTGAAGAAGTTTTCGAGAAATTAAAATGTGCACGAGAAGGTCTTAGTTTAGATGAGGTTGACAAGCGATTGACTGTGTTTGGGTACAACAGACTTGAAGAGAAAAAGGAAAATAAAATTCTGAAATTTCTGGGATTTATGTGGAATCCTCTCTCATGGGTTATGGAAGCAGCAGCAATCATGGCCATTTCTGTTGCAGATTTAGGGAATGAGGCTGTAGGTTACCATGACGTTTTTGGCATTCTGTTTCTGCTTCTTGTCGATTCAGGCATCAGCTTTGTATTTGAAAGCTATGATGACAATGAAGTGGTGGCCCTTATGGCTAGGCTGGCTCCAAAAGCAAAGGTTTTACGAGATGGCAAATGGATTGAGGAACATGCTTCTGTGTTGGTTCCTGGAGACATTATCAGTATCAAACTGGGAGATATCATCCCTGCTGATGCATGTTTACTTGAAGGAGATCCTCTGAAAATTGATCAGTCTGCTCTCACAGGAGAGTCATTCCCATTAACAAAACATACTGGTGAGGGAGTTTACTCTGGTTCAACATGTATGCAAGGTGAAACTGAAGCAGTGGTTACTGCAACTGGAGTGCATACTTTCTTTGGAAAGGCAGCTCATCTTGTGGAAACAAGTACACATGTTGGGCATTATCAGCAGGTTTTAACAGTAATTGGAAACTTTTGCATTTGCTCAATTGCCATCGGAATGTTGATTGAGATCATCATAATATACTGGGTCCAACACAGACACTATCATTCCGGAATAGGCAACCTGGTTGTCCTACTCATTGGCGGTATCCCAATTGCAATTCCAGCAGTTGTGTCTCTTATCATGTCCGTGGGTTTTCGTCACCTAACTCAGCAGGGTGTTATAACTAAGAGAATGGCAGCTATTGAGGACATGGCTGGGATGGATGTCCTCTGCAGTAATAAGACAGGAACTTTAACTCTTAACAAACTTACAATAGACAAGAATATGATCGAGGTTTTTGCCAAAGGTTTTGACCAGGAAATGGTTGTATTGATGGCTGCAAGAGCTTCAAGATTGGAGAATCAAGATGCTATTGATGCTGCAATTGTTTCAATGCTGGCTGATCCTAAGGAGGCACGAGCAGGAATTACAGAAGTTCACTTCCTTCCATTCAATCCAACTGATAAGAAGACAGCTCTTACATACATTAACAGTGCTGGTAAAATGCACAGGGCTAGCAAGGGTGCGCCAGAGCAGATTCTCAATCTGGCACATAACAAATCAGATATTGAAAGAAGAGTGCAATCAATAATCGATAAATTTGCAGAGCGTGGGATTGGATCCCTTGCAGTTGCATGTCAGGAAGTACCTGCTGGCACTGAAGACAGTCCTGGTGGGCCCTGGGAATTTGTTGGTCTTCTCCCACTCTTTGACCCACCTCGCCATGACAGTGCTGAAGCAATGAGAAGAGCTCTAGATCTCGGAGTAAGTGTTAAGATGATAACAGGTGACCAATTGGCCATTGCTAAGGAGACTGGGAGATGGCATGGAATGGGCACAAACATGTACCCTTCATCATCTTTGCTTGGAAATGACAAGGACCAGTCTATTGCAACCTTACCAGTTGATGAACTTATTGAAAAAGCTGATGGCTTTTCTGGTGTCTTTCCTGAACATAAGTATAAGATTGTGATGCGATTACAATCAAGAAAGCACATCGTTGGGATGACAGGAAATGGAGTCACTGATGCACCTGCAATTAAGAAAGCAGACATAGGAATTGCTGCGGCAGATTCAACAGATGCTGCTCGAGGCACTTGTGACATAGTACTGACAGAGCCTGGGCTAAGTGTAATCATTAGTGCTGTATTAACCAGCCGCTCAATCTTTCAAAGAATGAAGAACGTCATGACATATGCAGTATCTATCACAGTGCGTATGGTTCTAGGTTTTCTGGTGCTGACTGCATTCTGGAAGTTCGATTTCCCTCTTTACATGGTTCTTATGATTGCCATTCTTAATCATACTATTATGATTGCTACAGACGATGACAGGGTGAAGCCATCTCCAGTTCCTGACAGTTGGAAGCTTAGTGAAATTTTTGTGACTGGGATTGTCACAGGAACTTACCTTGCCCTGATGACAGTTGTATTCTTCTGGGCAGCTTATGAAACCAGTTTCTTTGCGAAGAACTTCCACGTAACAAACTTCAACAAGCATCAGTACAATCTCTCAGATGAGAAAACCTTAGACCATCTGCATGCACAGTTGGCATCTGCAGTGTACCTTCAAGTTAACACCATCAGCCAGGCTTTAATATTTGTGACTCGCTCCAGGGGCTGGTCGTTCATGCAAAGAGAAAGACCTCGTCTTCGTCTTGTTTCTGCCTTTGTCAGCATTCAATTGGCGGCAACAGTGATATCTGCCACAGCATCCTTGGAATTTGCTGGGATTAAAAAGATTGGTTGGGGTTGGACTGGTGTTATTTGGCTATACAACATTCTAACCTATATGTTGCTTGATCCTATCAAATTTGGTGTGCAATATGCTCTTAGTGGGAGAGCTTAG 4389 45.98 MAKSKCIKFLSDGYRYHQVYIYTRRERESHEKFNHGLAPHIDCSSFPYSSVNNSLYICISSLLIPHTLLLLLQLLRLLRFSSHVPGKSFSFSLSCLSRASTLLGSISTVCRRTFHLGFLSGAPHFGFGFGSYPCLRRSIITAYLIWFRSITRSLKGPRVWPVVGSLPLLIQNANRMHEWIAENLRSCGGTYQTCICPIPFLARKQGLVTVTCDPKNLEHILKIRFDNYPKGPTWQAVFHDLLGEGIFNSDGETWRFQRKTAALEFTTRTLRQAMARWVTRAIKLRFCPILKKAQLEGKPVDLQDLLLRLTFDNICGLAFGKDPQTLAPGLPENSFATAFDRATEATLQRFILPDTRKLELVSQQQGGSPHDDLLSRFMKKKEAYSDNFLQHVALNFILAGRDTSSVALSWFFWLVIQNPRAALSETLRLYPSVPEDSKHVVVDDVLPDGTFVPAGSAITYSIYSTGRMKFIWGEDCLEFRPERWLSADGKKIELQDSFKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLTVAPGHRVEQKMSLTLFMKYGLKVNVQPRDLTPILANIPKAKPNTKVNDYIIFHRSIRRATMDKTAIALEAISRGIVDLENIPLEEVFEKLKCAREGLSLDEVDKRLTVFGYNRLEEKKENKILKFLGFMWNPLSWVMEAAAIMAISVADLGNEAVGYHDVFGILFLLLVDSGISFVFESYDDNEVVALMARLAPKAKVLRDGKWIEEHASVLVPGDIISIKLGDIIPADACLLEGDPLKIDQSALTGESFPLTKHTGEGVYSGSTCMQGETEAVVTATGVHTFFGKAAHLVETSTHVGHYQQVLTVIGNFCICSIAIGMLIEIIIIYWVQHRHYHSGIGNLVVLLIGGIPIAIPAVVSLIMSVGFRHLTQQGVITKRMAAIEDMAGMDVLCSNKTGTLTLNKLTIDKNMIEVFAKGFDQEMVVLMAARASRLENQDAIDAAIVSMLADPKEARAGITEVHFLPFNPTDKKTALTYINSAGKMHRASKGAPEQILNLAHNKSDIERRVQSIIDKFAERGIGSLAVACQEVPAGTEDSPGGPWEFVGLLPLFDPPRHDSAEAMRRALDLGVSVKMITGDQLAIAKETGRWHGMGTNMYPSSSLLGNDKDQSIATLPVDELIEKADGFSGVFPEHKYKIVMRLQSRKHIVGMTGNGVTDAPAIKKADIGIAAADSTDAARGTCDIVLTEPGLSVIISAVLTSRSIFQRMKNVMTYAVSITVRMVLGFLVLTAFWKFDFPLYMVLMIAILNHTIMIATDDDRVKPSPVPDSWKLSEIFVTGIVTGTYLALMTVVFFWAAYETSFFAKNFHVTNFNKHQYNLSDEKTLDHLHAQLASAVYLQVNTISQALIFVTRSRGWSFMQRERPRLRLVSAFVSIQLAATVISATASLEFAGIKKIGWGWTGVIWLYNILTYMLLDPIKFGVQYALSGRA* 1463
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2828669 2842078 + Vvi2g305 Vvi2g305 783004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g305 1462 Pfam E1-E2 ATPase 726 904 - -
Vvi2g305 1462 Gene3D - 728 812 - -
Vvi2g305 1462 SMART Cation_ATPase_N_a_2 611 683 IPR004014 -
Vvi2g305 1462 PANTHER CALCIUM-TRANSPORTING ATPASE 597 1462 - -
Vvi2g305 1462 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 503 512 IPR017972 GO:0005506|GO:0016705
Vvi2g305 1462 SUPERFAMILY HAD-like 921 1231 IPR036412 -
Vvi2g305 1462 Pfam Cation transporter/ATPase, N-terminus 614 677 IPR004014 -
Vvi2g305 1462 Gene3D Cytochrome P450 149 562 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g305 1462 SUPERFAMILY Calcium ATPase, transmembrane domain M 611 1456 IPR023298 -
Vvi2g305 1462 SUPERFAMILY Cytochrome P450 146 562 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g305 1462 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 697 944 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi2g305 1462 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 1159 1263 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi2g305 1462 PRINTS H+-transporting ATPase (proton pump) signature 1041 1059 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi2g305 1462 PRINTS H+-transporting ATPase (proton pump) signature 1156 1172 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi2g305 1462 PRINTS H+-transporting ATPase (proton pump) signature 1184 1200 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi2g305 1462 PRINTS H+-transporting ATPase (proton pump) signature 1215 1240 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi2g305 1462 PRINTS H+-transporting ATPase (proton pump) signature 1369 1390 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi2g305 1462 Gene3D - 922 1221 IPR023214 -
Vvi2g305 1462 PANTHER PLASMA MEMBRANE ATPASE 597 1462 - -
Vvi2g305 1462 Gene3D - 937 1084 IPR023299 GO:0000166
Vvi2g305 1462 Pfam haloacid dehalogenase-like hydrolase 923 1198 - -
Vvi2g305 1462 Gene3D - 691 1426 - -
Vvi2g305 1462 SUPERFAMILY Calcium ATPase, transduction domain A 728 825 IPR008250 -
Vvi2g305 1462 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 630 1416 IPR006534 GO:0008553|GO:0016021|GO:0120029
Vvi2g305 1462 Pfam Cytochrome P450 155 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g305 1462 Pfam Cytochrome P450 421 549 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g305 1462 Pfam Cytochrome P450 367 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g305 1462 CDD P-type_ATPase_H 630 1452 IPR006534 GO:0008553|GO:0016021|GO:0120029
Vvi2g305 1462 PRINTS P-type cation-transporting ATPase superfamily signature 775 789 - -
Vvi2g305 1462 PRINTS P-type cation-transporting ATPase superfamily signature 925 939 - -
Vvi2g305 1462 PRINTS P-type cation-transporting ATPase superfamily signature 1079 1090 - -
Vvi2g305 1462 PRINTS P-type cation-transporting ATPase superfamily signature 1101 1111 - -
Vvi2g305 1462 PRINTS P-type cation-transporting ATPase superfamily signature 1184 1203 - -
Vvi2g305 1462 PRINTS P-type cation-transporting ATPase superfamily signature 1207 1219 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi2g305 Vvi15g849 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g305 K01535 - vvi:100246127 1701.8