Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g308 ATGTTAACCACCAACAAGAGTTCGGGCAGAGATGCCAATTTGTCATGCCAGGCGGAAGCAGCACTCCTAAGCGCAAAGAACTTCCATGTAACAAACTTCAACAAGTATCAGTACAATTCCTCAGATGAGAAAACCTTAGACCATCTGCATGCACTGTTGGCATCTGCAGTGTACCTTCAAGCTGTTAGCACCATCAGCCAGGCTTTAATATGTGTGACTCGCTCCAGGGGCTGGTCTTTCATGCAAAGAGAAAGACCTCGTCCTCGTCTTGTTTCTGCCTTTGTCGGTATTCAATTGGCCCCAACAGTGATATCTGCTACAGCATCATGGGAATTTGCTGGGATTAGAAAGATTGGCTGGGGTTGGACTGGTGTTATTTGGCTATACAACATTCTAACCTATATGTTGCTTGATCCTATCAAATTTGGTGTGCGATATGCTCTTAGTGGGAGAGCTTAG 459 45.32 MLTTNKSSGRDANLSCQAEAALLSAKNFHVTNFNKYQYNSSDEKTLDHLHALLASAVYLQAVSTISQALICVTRSRGWSFMQRERPRPRLVSAFVGIQLAPTVISATASWEFAGIRKIGWGWTGVIWLYNILTYMLLDPIKFGVRYALSGRA* 153
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2853792 2870798 + Vvi2g308 Vvi2g308 783007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g308 152 SUPERFAMILY Calcium ATPase, transmembrane domain M 34 148 IPR023298 -
Vvi2g308 152 Gene3D - 16 147 - -
Vvi2g308 152 PANTHER CALCIUM-TRANSPORTING ATPASE 25 152 - -
Vvi2g308 152 PANTHER PLASMA MEMBRANE ATPASE 25 152 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g308 K01535 - vvi:100246127 227.639