Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g364 ATGTTGGCTGGGTGTTCTACATTGTTGTCGCCCAGACATAGATTGAGGAGTGAAACATCTGCACAGTTTCAAGCTTGCCATTTCCAGTTACCTTCAATGAGCACACAGAGATTGGATTTGCCATGTAGCTTCCCCCGAAAAGATGCTTCACGGTCGCAGCCCATTAGGCCGGTCGGCCTTTCTGTGGAGAAGTCCATGGAAGCCAAGACTAGTACTTGTTCTCTAAAGCAGAATATTCGGCTCCCACCTTCAGCAACCAGTGCTCAGACCACCTTCATCGAAGGAAGGAGGGAGATCAAAGATGAGTTTTGGGAGAAAGGTAAGAGTTTGAAGAGGTTTGCTGAGCAGGGTTCAGTGGACGAGTCCTGCATGAGCAGAGCCAAGAGAAAAAGGAGAAGCCAACTGGTTTCTTTCCCTCTGACTTGTTCAGGAGAGGAAGAGAGGGTCTGTTTTGTGCCTAGTGAGGTGATTTCCCCACCTCTTCCATTGTCAAACAATCCTTGGCTGGAATCTGTAGTGACTGAGATTACAAGCCTTGGTGACAATGATTTGGAGACCAGCCATGGAGTTGTTAAGGAAGCCTCCGGATCCAGTAATTCTTCAGAGAGTCATCCCTTGGCCCTTAGGCTACATGAGAGCACTGTAGAGCAGGAAATCGGTAATGGGTCGAGCCTACCTCACCTGCATGAAGGCCCTAAGATGTCAGGGGACGACGAAAACAACCAAGGGGAGCATCAAGGTTTCGAGCTCATCAGCCTGCTTATGGCTTGTGTTGAAGCAATTGGCTCAAGGAACATAGCTGCCATCAGCCATTTCATAGCTAAATTGGGGGATCTTGCCTCTCCAAAAGGAAGTCCTATAAGCCGTGTTACTGCTTACTTCACAGAAGCTTTAGCTCTGCGGGTCTCAAGGCTTTGGCCTGCTATCTTCCATGTTACTACCCCTCGAGAGCTTGATCGGGCAGATGATGACACTTGGACTGCACTGAGGCTTTTGAACCAGGTGAGCCCAATTCCAAAATTCATTCACTTCACATCCAATGAGATTCTGTTGAGGGCTTTTGAAGGAAAAGACAGGGTTCATATCATAGATTTCGACATTAAGCAAGGGCTTCAATGGCCTAGTTTGTTTCAGAGTTTGGCCTCTAGGACTAATCCCCCGAGCCACATGTGA 1173 48.17 MLAGCSTLLSPRHRLRSETSAQFQACHFQLPSMSTQRLDLPCSFPRKDASRSQPIRPVGLSVEKSMEAKTSTCSLKQNIRLPPSATSAQTTFIEGRREIKDEFWEKGKSLKRFAEQGSVDESCMSRAKRKRRSQLVSFPLTCSGEEERVCFVPSEVISPPLPLSNNPWLESVVTEITSLGDNDLETSHGVVKEASGSSNSSESHPLALRLHESTVEQEIGNGSSLPHLHEGPKMSGDDENNQGEHQGFELISLLMACVEAIGSRNIAAISHFIAKLGDLASPKGSPISRVTAYFTEALALRVSRLWPAIFHVTTPRELDRADDDTWTALRLLNQVSPIPKFIHFTSNEILLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRTNPPSHM* 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3511309 3512833 + Vvi2g364 Vvi2g364 783063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g364 390 MobiDBLite consensus disorder prediction 219 242 - -
Vvi2g364 390 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 390 IPR005202 -
Vvi2g364 390 Pfam GRAS domain family 250 389 IPR005202 -
Vvi2g364 390 PANTHER SCARECROW-LIKE PROTEIN 28 4 390 IPR030027 -
Vvi2g364 390 ProSiteProfiles GRAS family profile. 241 390 IPR005202 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
14585 PF03514 GRAS 1.20E-44 CL0063 Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g364 - - vvi:100247949 735.717