Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g366 ATGAATGAAAATGGAATCCGAAGAGACCCGTATTATACGGATCCTGTGAGTGGGTATGTTTTCCGATCCAGAAAAGATGTCTTTCGCTATCTAAAAACTGGAGAGATTAGTAGGCATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAAGGTGCATTTCAAGCATGCTATTTGAAAATAGACCATTGGCCACCACCTGGAGCTAAAAGGCAGAAATTAATGCACCAGAAAACCAGGCGACGCCTTTTCTCAGCAACTGCTTCTGCAGATACAGGAAGTTCTGAAATGAGCAACTTATCCTTGCCAGAAAATCAGGGCTCAAGGCAAACCAAGCAGCTATTTTCTAAACCTAAGTTTGCTTTGGAGCCCTCAACTGAAACTCTCCAAGAGAAGCTTCTGGTGGAGAATGAAAAATATGCTGAATCTAAGAAAAGCTCTGGTAGGAGGAATTCAGATCTGCAAAAGGACAAAGGTTCCAAGAGAAAATCAAAAAACAAAGACTGTAACTTGCCTTGCCGTTCATCAAAACGGCTTGCTGGGCTCAAACCCGACCTGGTAGGCAACTCAGGATCCAGCGAACAGGCTCTTGCAGTTGCAGATAAGATCTCTGGTAAAAGTGAAGTAATTCCAGCTCTAGGTGTGATAATGGGCAGTTTGGACAATACGGCATGTTGTCAACTTGAGGTTGTCCTAGAAGCAGAGCCTGGACATCATGCTTCCAGAGCCATAGAAGCTCCATCAGATGTAGAGCAATCAAAGAAAGACAATAGGCATCTTGAAGATGAAGCTGTTCAAGAAGAGGAAGCTGGGAAACTGGAGACAGGGAAAAAGACTGGTGATGAGCCGGAGCTGCCACCAATGGACTTCCCTTTTATGGATGTCTGGTCAGATCCATGCCTAGAAGTTGCGTTCAAAACTCTTACGGGTGCTATACCCATAGAAGATAATCTGGAAATTGAGGGTTACTTTCAGCAACAAATTGACTCTTCTCACACCCAGAACAGTAGCCTGACACTGCCAGATTTTGGTTTACCAAGTTCCCAGTTTGATGCACAAGAAAAATCTGTACCCAGACAGCACTTTGCTTCAAAACCATCAGTTTTGCCCAAGGAAATCATGACCCCAAGCAATATCCTGGTCAACTTATGTCAGTTTTCATCACTGGAGAGGAGATTCAGAGAATTAGGGATAACTTTGTTACTTTCCTTCCTCATCCCAATCGAATTCATGGTAGCCATGTTAGCAGAAGGAACCAGCTTCTTCGATGTCTTCTTGCCTTTCCTCCTCCTCCTCCCACTTCTGGTCTTTCTCATCCTAAAGCTTTTAAAAGATTCATCTTCGCTCAAATCTCCACCACTCCCACCAGGACCTTCTCCATGGCCAATCTTAGGCAATCTTTTGCATCTGGGAAACATGCCTCACATCAGTTTAGCTCGCTTTAGCCAGTCCTATGGTCCTCTCATCTCGCTAAGACTCGGATCCCAAATCTTGGTGGTGGCATCAACATCCTCCGCCGCCATGGAAATTCTCAAGACGCATGATCGTGTTCTATCTGGTAGATATGTTCCTCACGCAGTACCAGCCAAGAATTCTGAAATCAACCGCATGTCTCTTGGATGGGCAGTTGAGTGCAATGATGCATGGAAGAATCTAAGGACAGTTTGTAGGGCTGAACTTTTCTCAACCAAAGTAATGGAGTCTCAAGCATGGGTGGGAGAGAAGAAGGTGATGGAGATGGTGAGATTTGTGAGCACAAAGGAGGGGGAGGTGATGAAAGTTGGAGAAGTGGTGTTTGCTACTGTACTTAATACCCTGACTACTGTTCTTATGTCCAGAGATTTTATCAGCTTTGAGGATGATTATAAGGATGGAGGCATGAAAGGACTTGTAAGGAAAATGATGATGGCCATGGCTGCTCCGAATTTGGATGATTTTTATTTAATTTTCAGTGGATTGGATCTTCAAGGTCTGAACAAGAAGACCAAGGAGCTGATTGCAAGGATTTGTTCCATGTGGGAGTCTGTCATCAGAGAGAGAAGAGAAGGTGCAAGCGATGACCCAAGCAAGCAGGACTTCTTGAATATTCTGATCCGCAGCGGCTACTCGGATGATCAAATCAATCAATTGTTCATGGAGTTGCTTACTGCAGGGGCAGACACCAGTAGTTCAACATTGGAGTGGGCAATGGCAGAACTGATAAAAAGTCCAGAATCCATGAAGAAAGTCCATGAAGAACTTGCAAGAGAAATCAGTGATAATCTGCCAAAAGCATCTGATCTACCTCACCTACCATACCTCCAAGCCTGTGTCAAAGAAACCCTGAGGCTGCACCCCTCGGCACCATTGCTCCTTCCTCGCCGTGCATCAGTCTCATGTGAAGTTATGAATTATACCATTCCAAAAGACTCTCAAATATGGGTAAATGCCTGGGCAATTGGGAGAGACCCCATGAATTGGGAAGACCCTCTAGTGTTTAAACCAGAGCGCTTCCTCAACTCAGCTGTAGACTTCAAAGGGAATAATCTAGAATTCATTCCCTTTGGTGCTGGAAGGAGAATATGCCCTGGTCTGCCCATGGCTGCAAGGCTTCTTCCTTTGATTCTTGCCTCCTTGACCCATTTCTTTGATTGGTCTCTTCCAAATGGAACCACTCCAGATGAGCTAGACATGAATGATAAGTTCGGTATAGCATTGCAGAAGGAACAACCTCTACTCATCATTCCTAAAGTTCGAAAATGA 2811 43.01 MNENGIRRDPYYTDPVSGYVFRSRKDVFRYLKTGEISRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGAFQACYLKIDHWPPPGAKRQKLMHQKTRRRLFSATASADTGSSEMSNLSLPENQGSRQTKQLFSKPKFALEPSTETLQEKLLVENEKYAESKKSSGRRNSDLQKDKGSKRKSKNKDCNLPCRSSKRLAGLKPDLVGNSGSSEQALAVADKISGKSEVIPALGVIMGSLDNTACCQLEVVLEAEPGHHASRAIEAPSDVEQSKKDNRHLEDEAVQEEEAGKLETGKKTGDEPELPPMDFPFMDVWSDPCLEVAFKTLTGAIPIEDNLEIEGYFQQQIDSSHTQNSSLTLPDFGLPSSQFDAQEKSVPRQHFASKPSVLPKEIMTPSNILVNLCQFSSLERRFRELGITLLLSFLIPIEFMVAMLAEGTSFFDVFLPFLLLLPLLVFLILKLLKDSSSLKSPPLPPGPSPWPILGNLLHLGNMPHISLARFSQSYGPLISLRLGSQILVVASTSSAAMEILKTHDRVLSGRYVPHAVPAKNSEINRMSLGWAVECNDAWKNLRTVCRAELFSTKVMESQAWVGEKKVMEMVRFVSTKEGEVMKVGEVVFATVLNTLTTVLMSRDFISFEDDYKDGGMKGLVRKMMMAMAAPNLDDFYLIFSGLDLQGLNKKTKELIARICSMWESVIRERREGASDDPSKQDFLNILIRSGYSDDQINQLFMELLTAGADTSSSTLEWAMAELIKSPESMKKVHEELAREISDNLPKASDLPHLPYLQACVKETLRLHPSAPLLLPRRASVSCEVMNYTIPKDSQIWVNAWAIGRDPMNWEDPLVFKPERFLNSAVDFKGNNLEFIPFGAGRRICPGLPMAARLLPLILASLTHFFDWSLPNGTTPDELDMNDKFGIALQKEQPLLIIPKVRK* 937
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3513810 3521744 - Vvi2g366 Vvi2g366 783065

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g366 936 MobiDBLite consensus disorder prediction 90 144 - -
Vvi2g366 936 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 1 82 IPR001739 GO:0003677
Vvi2g366 936 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 445 936 - -
Vvi2g366 936 Gene3D Cytochrome P450 468 934 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g366 936 PANTHER 3'-HYDROXYLASE ISOZYME, PUTATIVE-RELATED 445 936 - -
Vvi2g366 936 PRINTS E-class P450 group I signature 505 524 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g366 936 PRINTS E-class P450 group I signature 729 746 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g366 936 PRINTS E-class P450 group I signature 749 775 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g366 936 PRINTS E-class P450 group I signature 791 809 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g366 936 PRINTS E-class P450 group I signature 832 856 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g366 936 PRINTS E-class P450 group I signature 868 878 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g366 936 PRINTS E-class P450 group I signature 878 901 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g366 936 SUPERFAMILY Cytochrome P450 478 935 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g366 936 MobiDBLite consensus disorder prediction 163 199 - -
Vvi2g366 936 MobiDBLite consensus disorder prediction 262 307 - -
Vvi2g366 936 MobiDBLite consensus disorder prediction 262 312 - -
Vvi2g366 936 Coils Coil 74 74 - -
Vvi2g366 936 Gene3D - 2 40 - -
Vvi2g366 936 SUPERFAMILY DNA-binding domain 3 36 IPR016177 GO:0003677
Vvi2g366 936 Coils Coil 273 293 - -
Vvi2g366 936 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 871 880 IPR017972 GO:0005506|GO:0016705
Vvi2g366 936 MobiDBLite consensus disorder prediction 105 138 - -
Vvi2g366 936 PRINTS P450 superfamily signature 740 757 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g366 936 PRINTS P450 superfamily signature 792 803 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g366 936 PRINTS P450 superfamily signature 869 878 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g366 936 MobiDBLite consensus disorder prediction 163 195 - -
Vvi2g366 936 Pfam Cytochrome P450 478 925 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g366 - - - vvi:100247960 1003.43
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g366 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000969 6 2 3 2 3 2 1 3 3 2 3 2 1 1 1 2 2 11 1 3 2 3 2 3 3 3 0 2 4 4 80