Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g371 ATGGTTTCTAAGATACATGCCAGCATTTTCCTTCTTCTTCTTAGTAAGATGTGGCCAATTGCTTTGTGCATTGGAACTTTTGTTATTATAAGGATTATACATTGGGGTTACAGCTGGAGGAATCCCAAATGCAATGGGAAACTTCCACCAGGTTCAATGGGCTTGCCATTACTTGGTGAGACCCTTCAGTTCTTCGCCCCCAACACTTCTTCTGATATTCCTCCCTTCATTAAAGAGAGGATGGAAAGGTATGGGCCTATATTTCGAACCAATTTGGTGGGACGGCCAGTTGTTGTATCAACAGACCCAGATCTTAACTATTTCATCTTTCAACAAGAAGGACAATTGTTCCAGAGCTGGTATCCAGATACATTCACAGAGATCTTTGGGCGACAGAATGTGGGTTCCTTACATGGGTTTATGTACAAGTACCTTAAGAACATGGTGTTGAACCTCTTTGGTCCTGAAAGCCTGAAAAAGATGCTCCCTGAGGTTGAACACGCCACATGTAGAAATTTAGACAGGTGGTCATGTCAAGACACTGTTGAATTGAAGGAAGCAACTGCAAGAATGATATTTGATCTGACTGCAAAGAAACTCATCAGTTATGAACAAGACAAGTCCTCAGAAAATCTAAGGGAGAACTTTGTTGCTTTCATACAGGGATTAATCTCCTTCCCTTTGGATATTCCTGGAACAGCTTACCACAAATGTTTGCAGGGAAGGAAGAAGGCAATGAGCATGCTGAAGAACATGCTAAAGGAGAGACGAGCAATGCCTAGGAAGAAGCAGAGTGATTTCTTTGATTATGTAATTGAAGAACTTAAGAAAGAAGGAACAATCCTCACAGAAGCAATTGCATTAGATTTAATGTTTGTACTCCTCTTTGCCAGCTTCGAGACAACTTCATTGGCTATAACTTTAGCTACGAAGTTTCTTTCTGACCATCCTTTGGTGCTGAAGAAATTAACGGAAGAGCATGAGGCAATTCTAGAAAAACGGGAAATTGTGGATTCTGAACTTACATGGAAAGAATACAAATCAATGACATTCACATTTCAGTTCATCAATGAAACAGTTAGGCTGGCAAATATAGTTCCAGGAATCTTCAGGAAGGCGCTGAGAGAAATCCAGTTTAAGGGATATACCATTCCAGCAGGTTGGGCGATTATGGTCTGTCCGCCAGCTGTGCATCTGAACCCAGCAAAATATGAAGATCCCCTTGCCTTCAATCCATGGAGATGGGAGGGAGTAGAATCCAGTGGTGCATCTAAGCATTTCATGGCCTTTGGTGGTGGCATGAGGTTTTGTGTCGGAACAGACTTTACCAAAATGCAGATGGCTGTGTTCCTCCATTGCTTGGTTACAAAGTACAGGTGGCAAACAGTCAGAGGAGGAGACATTGTCCGGACTCCTGGTTTACAATTTCCAAATGGTTTCCATGTTCAGATATTGGGGAAAAATTAA 1467 41.85 MVSKIHASIFLLLLSKMWPIALCIGTFVIIRIIHWGYSWRNPKCNGKLPPGSMGLPLLGETLQFFAPNTSSDIPPFIKERMERYGPIFRTNLVGRPVVVSTDPDLNYFIFQQEGQLFQSWYPDTFTEIFGRQNVGSLHGFMYKYLKNMVLNLFGPESLKKMLPEVEHATCRNLDRWSCQDTVELKEATARMIFDLTAKKLISYEQDKSSENLRENFVAFIQGLISFPLDIPGTAYHKCLQGRKKAMSMLKNMLKERRAMPRKKQSDFFDYVIEELKKEGTILTEAIALDLMFVLLFASFETTSLAITLATKFLSDHPLVLKKLTEEHEAILEKREIVDSELTWKEYKSMTFTFQFINETVRLANIVPGIFRKALREIQFKGYTIPAGWAIMVCPPAVHLNPAKYEDPLAFNPWRWEGVESSGASKHFMAFGGGMRFCVGTDFTKMQMAVFLHCLVTKYRWQTVRGGDIVRTPGLQFPNGFHVQILGKN* 489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3590881 3593551 + Vvi2g371 Vvi2g371 783070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g371 488 Gene3D Cytochrome P450 40 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g371 488 Pfam Cytochrome P450 49 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g371 488 PRINTS E-class P450 group I signature 81 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g371 488 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g371 488 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g371 488 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g371 488 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g371 488 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g371 488 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g371 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Vvi2g371 488 PANTHER CYTOCHROME P450 26 26 485 - -
Vvi2g371 488 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g371 488 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g371 488 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g371 488 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g371 488 PANTHER CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 2 26 485 - -
Vvi2g371 488 SUPERFAMILY Cytochrome P450 45 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g371 488 Coils Coil 320 340 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi2g371 Vvi16g611 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g371 - - vvi:100258216 961.829