Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g417 ATGGGAGGTCGGCCTCTGGGCGATGAGCCACTCAGGCCAATTCACCACTCCATGCTTGAAACTGTGCTTGGAAGCACTTCATCAGCCAAGGAGTCACTGGTTTATAGCTATGGCCGGAGTTTTAATGGGTTTGCAGCTAGATTATCTGATGAAGAAGTAGGGAGATTATCAGAAATGGAGGGAGTGGTTTCAGTTACTCCAAACCATATATTAAAGCTTCACACAACAAGGTCATGGGACTTCATGGGCTTCAGCAAGGGCACTGTTGGAGGGTCCGAAGAAGGAGAAATCATTGTTGCACTTCTAGACACAGGAATCTGGCCAGAATCTGAAAGCTTCAATGATGAAGGATTTGGCTCCCCACCTTCTAAATGGAATGGGACATGCCAAGGTGCCAATTTCACCTGCAACAACAAGATCATTGGGGCACGATACTACAACAGTGAAGGATATTATGACATTTCAGACTTCAAATCTCCAAGGGACTCCTTAGGGCATGGGACACATACAGCCTCAACCGCTGCAGGCAGGGAGGTGGATGGAGCAAGCTACTTTGGACTAGCTAAGGGAACTGCAAGAGGTGCAGTGCCTAATGCAAGAATTGCTGTGTACAAAGTTTGCTGGTATTATGGATGTGCTGTTGCAGACATCTTTGCAGCTTTCGACGATGCTATAGCAGATGGTGTAGATATCATTTCAGTGTCTCTTGGAGCTGACTTCCCTTTGGAATACCTCCAAGACCCAATTGCTATTGGATCTTTCCATGCCATGAAATATGGTATCTTAACCTCAAGCTCTGCCGGTAACTCTGGCCCCTTTCCAGTAACAGTTTCCAACTACGCGCCTTGGATACTGACTGTTGCTGCCAGCAGCATTGACAGAAAATTTGTCGCCCAGGTGGTGCTTAGCAATGGACAAGTCTACACTGGACTCTCGGTTAACAGCTTTGAGCTCAACGGGACCACATTTCCCTTGATCTGGGGAGGAGATGCTGCAAACGTTTCTGCTGGTTACAGTTCGGACTTTTCAAGATATTGCCTACCTGATACCTTGGACTCGTACAAAATTAAGGGAAAGATTGTTCTCTGTGACACCCTTTGGGATGGTTCTACCGTTCTTTTGGCAGATGGTGTAGGTACAATAATGGCTGATCTAATAACTGATTATGCCTTCAACTACCCATTACCAGCAACTCAAATCAGTGTAGAAGATGGCCTTGCAATTTTGGATTACATCAGAACTGCCAAAAATCCTTTGGCGACTATTCTATTTAGTGAGACTTGGAACGACGTCATGGCACCCAATGTAGTTTCATTTTCTTCAAGAGGACCCAACCCGATCACCCCAGACATTCTTAAGCCTGATATAACTGCCCCTGGTGTGGACATCCTTGCTGCTTGGTCACCCGTGGCACCACCTTCCATCTACTATCTGGACACCAGGAGTGTCGACTACAATATTATCTCTGGGACATCCATGTCTTGCCCTCATGCTAGTGGTGCCGCAGCCTATGTCAAGGCTGCCCACCCCAACTGGTCTCCCGCTGCAATTAAATCTGCCCTCATGACCACAGCTCATGTGATGGACCCAAGGAAGCACGAAGACCTCGAATTTGCTTATGGGTCAGGTCACATCAACCCCTTGAATGCAACAGATCCCGGACTTGTGTATGATGCATCAGAGGCAGATTACATAAGCTTCCTCTGCAAGCAGGGTTACAACACCTCCACACTGAGACTTGTCACAGGGGACGACAGTGTTTGCAACAGCACAGAGCCTGGAAGAGCTTGGGATCTCAATTATCCCTCATTCTCGCTAGCTGTGGAAGATGGGAACCAAATCATGGGTGTCTTCACCAGGACGGTTACTAATGTTGGCTCTCCCAACTCAACCTACACTGCCGGCATGTACGTGCCTACCACCCTCAGTGTCACAGTGGAGCCATCCGTAATATCATTCTCTGCCATCGGAGAGAAGAAATCATTCACAGTGAAGGTGTATGGACCTAAGATTTCGCAACAGCCCATCATGTCTGGTGCAATATGGTGGACAGATGGGGTCCATGAGGTAAGAAGCCCACTTGTGGTGTACACAGTTCTCCCAGGTGCTACCTATTCTTCCTACTCCATGTCTCACAAGAAACCAGTTTTCAAAGGTTCTTCCATCTATCACAAGAATGGGATCCTTGGAAACAACTAA 2199 47.43 MGGRPLGDEPLRPIHHSMLETVLGSTSSAKESLVYSYGRSFNGFAARLSDEEVGRLSEMEGVVSVTPNHILKLHTTRSWDFMGFSKGTVGGSEEGEIIVALLDTGIWPESESFNDEGFGSPPSKWNGTCQGANFTCNNKIIGARYYNSEGYYDISDFKSPRDSLGHGTHTASTAAGREVDGASYFGLAKGTARGAVPNARIAVYKVCWYYGCAVADIFAAFDDAIADGVDIISVSLGADFPLEYLQDPIAIGSFHAMKYGILTSSSAGNSGPFPVTVSNYAPWILTVAASSIDRKFVAQVVLSNGQVYTGLSVNSFELNGTTFPLIWGGDAANVSAGYSSDFSRYCLPDTLDSYKIKGKIVLCDTLWDGSTVLLADGVGTIMADLITDYAFNYPLPATQISVEDGLAILDYIRTAKNPLATILFSETWNDVMAPNVVSFSSRGPNPITPDILKPDITAPGVDILAAWSPVAPPSIYYLDTRSVDYNIISGTSMSCPHASGAAAYVKAAHPNWSPAAIKSALMTTAHVMDPRKHEDLEFAYGSGHINPLNATDPGLVYDASEADYISFLCKQGYNTSTLRLVTGDDSVCNSTEPGRAWDLNYPSFSLAVEDGNQIMGVFTRTVTNVGSPNSTYTAGMYVPTTLSVTVEPSVISFSAIGEKKSFTVKVYGPKISQQPIMSGAIWWTDGVHEVRSPLVVYTVLPGATYSSYSMSHKKPVFKGSSIYHKNGILGNN* 733
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4146731 4149948 + Vvi2g417 Vvi2g417 783116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g417 732 Pfam Fibronectin type-III domain 598 696 IPR041469 -
Vvi2g417 732 Gene3D - 293 429 - -
Vvi2g417 732 Pfam Peptidase inhibitor I9 15 74 IPR010259 -
Vvi2g417 732 Gene3D Peptidase S8/S53 domain 97 564 IPR036852 GO:0004252|GO:0006508
Vvi2g417 732 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 5 703 IPR045051 -
Vvi2g417 732 ProSiteProfiles Serine proteases, subtilase domain profile. 78 551 - -
Vvi2g417 732 SUPERFAMILY Subtilisin-like 73 555 IPR036852 GO:0004252|GO:0006508
Vvi2g417 732 Pfam Subtilase family 96 541 IPR000209 GO:0006508|GO:0008236
Vvi2g417 732 Gene3D - 568 699 - -
Vvi2g417 732 ProSitePatterns Serine proteases, subtilase family, serine active site. 490 500 IPR023828 -
Vvi2g417 732 PRINTS Subtilisin serine protease family (S8) signature 94 113 IPR015500 -
Vvi2g417 732 PRINTS Subtilisin serine protease family (S8) signature 162 175 IPR015500 -
Vvi2g417 732 PRINTS Subtilisin serine protease family (S8) signature 489 505 IPR015500 -
Vvi2g417 732 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 74 IPR037045 -
Vvi2g417 732 PANTHER CUCUMISIN-LIKE 5 703 - -
Vvi2g417 732 CDD PA_subtilisin_like 300 422 - -
Vvi2g417 732 CDD Peptidases_S8_3 71 526 IPR034197 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi2g417 Vvi16g563 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g417 - - vvi:100247874 1454.5