Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g465 ATGGAGTGCTGGAGGAGACAAAAGAGAGAGATGGAGAGAGAAAGGTGGGGACCCATCCACCGCCCATACGCACGCAAGATCAGTAGAAGACCCCGGGGAAGACCCGCTGGATCCAAGAACAAGCCCAAGCCTCCGATCATCATTACTCGCGATAGCGCCAATGCTTTGCGCACCCATGTGATGGAGATTGCTGACGGGTGCGACATCGTGGAGAGCGTCGCCACCTTTGCCCGACGTCGTCAGAGAGGGGTTTGCATTATGAGTGGAACTGGCACTGTAACGAACGTTACTCTTCGGCAACCGGCCTCACCTGGTGCAATTGTCACCCTACACGGCCGTTTCGAGATCTTATCCTTATCCGGATCCTTTTTACCTCCTCCAGCTCCGCCTGCTGCCACGGGGTTGACCATTTACTTAGCTGGCGGCCAAGGGCAGGTGGTGGGTGGAAGCGTTGTGGGGCAACTACTGGCTTCGGGTCCAGTTGTGATTATGGCAGCGTCATTCAGCAACGCCGCCTATGAGCGGCTTCCCCTTGAAGAGGAAGACCCTGCTCTACCAATGCCAGGAGGTTCCCTAGGCTCTCCCGGAGGGCAACCGCAGCAGCCACAGCAACTTTTAGCAGATCCAAACGCACCTCTTTTTCATGGGTTACCACCCAACCTTCTCAACTCCATCCAATTACCAGCGGAGGCCTACTGGGCTACAGGCCGCCCTCCATACTAA 723 56.43 MECWRRQKREMERERWGPIHRPYARKISRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEIADGCDIVESVATFARRRQRGVCIMSGTGTVTNVTLRQPASPGAIVTLHGRFEILSLSGSFLPPPAPPAATGLTIYLAGGQGQVVGGSVVGQLLASGPVVIMAASFSNAAYERLPLEEEDPALPMPGGSLGSPGGQPQQPQQLLADPNAPLFHGLPPNLLNSIQLPAEAYWATGRPPY* 241
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4563883 4565588 - Vvi2g465 Vvi2g465 783164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g465 240 SUPERFAMILY AF0104/ALDC/Ptd012-like 53 188 - -
Vvi2g465 240 MobiDBLite consensus disorder prediction 22 37 - -
Vvi2g465 240 MobiDBLite consensus disorder prediction 1 46 - -
Vvi2g465 240 Gene3D - 56 184 - -
Vvi2g465 240 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 24 240 IPR014476 GO:0003680
Vvi2g465 240 MobiDBLite consensus disorder prediction 1 21 - -
Vvi2g465 240 CDD DUF296 57 124 IPR005175 -
Vvi2g465 240 MobiDBLite consensus disorder prediction 181 210 - -
Vvi2g465 240 ProSiteProfiles PPC domain profile profile. 53 189 IPR005175 -
Vvi2g465 240 Pfam Plants and Prokaryotes Conserved (PCC) domain 57 170 IPR005175 -
Vvi2g465 240 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 24 240 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g465 - - vvi:100265031 337.035