Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g468 ATGATGCCGGCTAAGAAGAAGAGGGGTAGACCAAGGAAATACGGACCAGACGGGACGGTGACGATGGCTCTGTCACCAAAGCCGATATCTTCTTCGGCTCCTGGACCGCCGGTGATCGACTTCTCAGTGGAGAAGCGTGGAAAAATACGGCCGGTGGGTTCAGCGAGCAAAAGTAAGATGGAGCTGGAGAATTTAGGTGAATGGGTTGCATGCTCTGTTGGTGCTAATTTCACACCTCATATCATCACCGTTAATTCTGGCGAGGACGTTACCATGAAGATTATATCATTTTCTCAACAAGGGCCTCGAGCAATATGCATTCTCTCTGCAAATGGAGTGATTTCTAGTGTCACACTTCGTCAGCCTGATTCTTCAGGGGGCACCTTGACATATGAGGGTCGCTTTGAGATACTCTCCTTGTCAGGATCATTCATGCCTAGCGATAGTGGAGGAACAAGGAGCAGATCTGGTGGGATGAGCGTTTCTCTAGCAAGTCCAGATGGGCGTGTTGTAGGGGGAGGTGTCGCTGGTCTGTTAGTAGCTGCCAGTCCTGTGCAAGTTGTGGTGGGCAGCTTTCTAACAGGGAACCAGCATGAGCAGAAACCCAAGAAACAGAAAATTGAACCTATATCAGCTGCCAGACCAACTGCAGCAGTTCCTATTTCTACTACCCCAAAACCAAATCTCTCATCCTCCACTTCATTCCGTGGAGACAACTGGTCTCCATTGCCATCAGATTCAAGGAATAAGGCAACTGACATTAATGTATCTTTGCCTGGAGGTTAA 786 48.6 MMPAKKKRGRPRKYGPDGTVTMALSPKPISSSAPGPPVIDFSVEKRGKIRPVGSASKSKMELENLGEWVACSVGANFTPHIITVNSGEDVTMKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDSGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLTGNQHEQKPKKQKIEPISAARPTAAVPISTTPKPNLSSSTSFRGDNWSPLPSDSRNKATDINVSLPGG* 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4609184 4617105 + Vvi2g468 Vvi2g468 783167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g468 261 SUPERFAMILY AF0104/ALDC/Ptd012-like 76 196 - -
Vvi2g468 261 ProSiteProfiles PPC domain profile profile. 74 213 IPR005175 -
Vvi2g468 261 MobiDBLite consensus disorder prediction 217 254 - -
Vvi2g468 261 Pfam Plants and Prokaryotes Conserved (PCC) domain 79 192 IPR005175 -
Vvi2g468 261 CDD DUF296 78 169 IPR005175 -
Vvi2g468 261 MobiDBLite consensus disorder prediction 1 37 - -
Vvi2g468 261 Gene3D - 79 211 - -
Vvi2g468 261 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 4 259 IPR039605 GO:0003680
Vvi2g468 261 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 4 259 - -
Vvi2g468 261 MobiDBLite consensus disorder prediction 196 261 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi2g468 Vvi16g499 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g468 - - vvi:100244375 469.929