Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi2g468 | ATGATGCCGGCTAAGAAGAAGAGGGGTAGACCAAGGAAATACGGACCAGACGGGACGGTGACGATGGCTCTGTCACCAAAGCCGATATCTTCTTCGGCTCCTGGACCGCCGGTGATCGACTTCTCAGTGGAGAAGCGTGGAAAAATACGGCCGGTGGGTTCAGCGAGCAAAAGTAAGATGGAGCTGGAGAATTTAGGTGAATGGGTTGCATGCTCTGTTGGTGCTAATTTCACACCTCATATCATCACCGTTAATTCTGGCGAGGACGTTACCATGAAGATTATATCATTTTCTCAACAAGGGCCTCGAGCAATATGCATTCTCTCTGCAAATGGAGTGATTTCTAGTGTCACACTTCGTCAGCCTGATTCTTCAGGGGGCACCTTGACATATGAGGGTCGCTTTGAGATACTCTCCTTGTCAGGATCATTCATGCCTAGCGATAGTGGAGGAACAAGGAGCAGATCTGGTGGGATGAGCGTTTCTCTAGCAAGTCCAGATGGGCGTGTTGTAGGGGGAGGTGTCGCTGGTCTGTTAGTAGCTGCCAGTCCTGTGCAAGTTGTGGTGGGCAGCTTTCTAACAGGGAACCAGCATGAGCAGAAACCCAAGAAACAGAAAATTGAACCTATATCAGCTGCCAGACCAACTGCAGCAGTTCCTATTTCTACTACCCCAAAACCAAATCTCTCATCCTCCACTTCATTCCGTGGAGACAACTGGTCTCCATTGCCATCAGATTCAAGGAATAAGGCAACTGACATTAATGTATCTTTGCCTGGAGGTTAA | 786 | 48.6 | MMPAKKKRGRPRKYGPDGTVTMALSPKPISSSAPGPPVIDFSVEKRGKIRPVGSASKSKMELENLGEWVACSVGANFTPHIITVNSGEDVTMKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDSGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLTGNQHEQKPKKQKIEPISAARPTAAVPISTTPKPNLSSSTSFRGDNWSPLPSDSRNKATDINVSLPGG* | 262 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 4609184 | 4617105 | + | Vvi2g468 | Vvi2g468 | 783167 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi2g468 | 261 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 76 | 196 | - | - | |
Vvi2g468 | 261 | ProSiteProfiles | PPC domain profile profile. | 74 | 213 | IPR005175 | - | |
Vvi2g468 | 261 | MobiDBLite | consensus disorder prediction | 217 | 254 | - | - | |
Vvi2g468 | 261 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 79 | 192 | IPR005175 | - | |
Vvi2g468 | 261 | CDD | DUF296 | 78 | 169 | IPR005175 | - | |
Vvi2g468 | 261 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Vvi2g468 | 261 | Gene3D | - | 79 | 211 | - | - | |
Vvi2g468 | 261 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 4 | 259 | IPR039605 | GO:0003680 | |
Vvi2g468 | 261 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 | 4 | 259 | - | - | |
Vvi2g468 | 261 | MobiDBLite | consensus disorder prediction | 196 | 261 | - | - |
Event-related genes

Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi2g468 | - | - | vvi:100244375 | 469.929 |