Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g495 ATGTCCTCCTCTTCAACCTTGTCGCTGGACCACCTCCCTCCTTCCGAGCAGCTCTGTTATGTCCATTGCAACATTTGCGACACCGTTCTCGCGGTGAGCGTTCCTTGCACCAGTCTGTTCAAGACCGTTACTGTTCGATGTGGACACTGCACCAACCTGTTGCCTGTAAACCTTCGTGGATTGCTTCTACCTTCAGCCAATCAGCTTCACCTGGGCCACGCCTTCTTCTCTCCTTCCCATAATCTTCTGGAAGAGATCCCAAATCCATCTCCGAACTTTTTGATCAATCAGACCACCGCAAATGACTTTTCTGTGTCAGCTAGAGGAGGAGCTGATGAACTTCCCAGACCCCCGGTGATTAACAGACCTCCGGAGAAGAGACAGAGAGTCCCGTCCGCGTACAACCGATTCATCAAGGACGAGATCCAACGCATCAAGGCGGGAAACCCTGATATAACTCACAGAGAAGCCTTCAGTGCAGCTGCAAAGAATTGGGCCCATTTCCCTCACATCCACTTTGGACTCATGCCTGATCAGACGATGAAGAAGACTAACGTGCGCCAACAGGAAGGAGAGGACGTTCTCATGAAAGATGGCTTCTTTGCTTCTGCCAATGTCGGTGTCTCTCCTTACTAG 636 50.94 MSSSSTLSLDHLPPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVNLRGLLLPSANQLHLGHAFFSPSHNLLEEIPNPSPNFLINQTTANDFSVSARGGADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHREAFSAAAKNWAHFPHIHFGLMPDQTMKKTNVRQQEGEDVLMKDGFFASANVGVSPY* 212
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4861964 4864774 + Vvi2g495 Vvi2g495 783194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g495 211 Pfam YABBY protein 14 175 IPR006780 GO:0007275
Vvi2g495 211 Gene3D High mobility group box domain 120 186 IPR036910 -
Vvi2g495 211 SUPERFAMILY HMG-box 119 168 IPR036910 -
Vvi2g495 211 PANTHER PROTEIN YABBY 6-RELATED 1 209 IPR006780 GO:0007275
Vvi2g495 211 PANTHER PROTEIN YABBY 4 1 209 - -
Vvi2g495 211 MobiDBLite consensus disorder prediction 107 127 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
14596 PF04690 YABBY 7.70E-71 CL0114 Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g495 K25796 - vvi:100267708 435.261