Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi2g541 | ATGTTATCTTTGTTCCTAAATCATGATCTCTTTCTCTGTTGGCAGGAGAACATCCCTCTTGAAGAAGTTTTTGAGAAATTAAAATGCACAAGAGAAGGTCTCGGCTTGGATGAGGTAGAGAAGCGATTGAAGGTGTTTGGGCACAACAAACTTGAAGAGAAAAAGGAAAATAAGATTATCAAATTTTTGGGATTTATGTGGAATCCTCTCTCATGGGTTATGGAAGCAGCAGCAATCATGGCCATTTCTCTTGCACTTAAAGAGAATAAGGATGTAGATTACATAACCTTTCTTGGCATTCTGGCACTGCATATTATCAATTCAGCCATCAGCTTTGTAGAGGAAAACAAAACTGGCAATGCTGTGGCTCGCCTTATGGCTTGGCTGGCTCCAAAAGCAACGGTTTTACGAGCTGGCAAATGGAGTAAGGAATATGCTTCTGTGTTGGTTCCTGGAGACATTGTCAGTATCAAACCAGGAGATATCATCCCTGCTGATGCACGTTTACTTGAAGGAGATCCTCTGAAAATTGATCAGGGTTACTTATTTGGAAAT | 555 | 40.54 | MLSLFLNHDLFLCWQENIPLEEVFEKLKCTREGLGLDEVEKRLKVFGHNKLEEKKENKIIKFLGFMWNPLSWVMEAAAIMAISLALKENKDVDYITFLGILALHIINSAISFVEENKTGNAVARLMAWLAPKATVLRAGKWSKEYASVLVPGDIVSIKPGDIIPADARLLEGDPLKIDQGYLFGN | 185 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 5393506 | 5396372 | - | Vvi2g541 | Vvi2g541 | 783240 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi2g541 | 185 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 15 | 184 | - | - | |
Vvi2g541 | 185 | Gene3D | - | 131 | 184 | - | - | |
Vvi2g541 | 185 | SMART | Cation_ATPase_N_a_2 | 13 | 86 | IPR004014 | - | |
Vvi2g541 | 185 | Gene3D | - | 93 | 130 | - | - | |
Vvi2g541 | 185 | PANTHER | PLASMA MEMBRANE ATPASE | 15 | 184 | - | - | |
Vvi2g541 | 185 | Pfam | E1-E2 ATPase | 129 | 182 | - | - | |
Vvi2g541 | 185 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 16 | 132 | IPR023298 | - | |
Vvi2g541 | 185 | SUPERFAMILY | Calcium ATPase, transduction domain A | 131 | 184 | IPR008250 | - | |
Vvi2g541 | 185 | Pfam | Cation transporter/ATPase, N-terminus | 17 | 80 | IPR004014 | - |
Event-related genes

Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi2g541 | K01535 | - | vvi:104882170 | 312.383 |