Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g604 ATGGAGTTTATGAGAATACTGTTGAGTATACTGGTTCTGATATTCCATGGCAATACTGGAGTTTTGAGCGAGGCCGGGGTTCTTGTTCTTGACTACTACAAAGAAGCATGCCCTTTAGTCGAAGAGATTGTGAGACGTAATGTTGAGATTGCAGTGCTTAGAGATCCTCGCATGGCTGCCTCACTCCTTCGCTTACATTTTCATGACTGTTTTGTTATGGGATGCGATGCCTCTATTCTTCTGGACACCTTTGGGGATATGATAAGTGAAAAACAAGCTGGGCCTAACCTGAACTCGGTACGAGGATTTGGGGTGATCGACAATATCAAGCACTTGGTAGAAGAGGCATGCCCATACACAGTCTCATGTGCTGATATTCTAGCCATAGTTGCTCGTGATGCTGTTGTATTGAGGGGAGGGCCCAGATGGGAGGTTTGGCTAGGCAGGAAAGACTCATTGAAAGCAAGCTTTGATGGAGCCAACCAGTTCATACCTGCTCCAAATTCCTCACTAGAGACACTCATCGCCAATTTTAAGCAACAGGGTCTCGACACAGGAGACTTGGTTACTTTATCTGGTAGCCACACAATGGGAAAGGCCAGGTGCGTAAGCTTCAGGCAGAGAATCTACGAGAAGAGCACAGAAGAAAACTTTGATTATTACAAGAGATACACAACATTTAGAAGGATCTTACGGTCCATATGCCCAGAATCAGGGAGAGACGATGCACTGGGAGCACTTGATTTCAAGACTCCTACAAGATTCGACAACTTATACTTCCATAATATTATTGAAGGAAAAGGTTTACTACAATCAGATAATGTGTTGGTGAGGGAAGATCTTGAAGGGGAGATAAGAGAGCAAGTGCGGGCATATGCTTCTGATCAACAACTTTTCTTTGCTTCATATGTGAATTCAATTGTGAAGATGGGAAACATCAATGTACTCACAGGAAATGAAGGAGAAGTTAGAAAAAATTGTAGGTTTGTGAATCCTTAG 999 43.24 MEFMRILLSILVLIFHGNTGVLSEAGVLVLDYYKEACPLVEEIVRRNVEIAVLRDPRMAASLLRLHFHDCFVMGCDASILLDTFGDMISEKQAGPNLNSVRGFGVIDNIKHLVEEACPYTVSCADILAIVARDAVVLRGGPRWEVWLGRKDSLKASFDGANQFIPAPNSSLETLIANFKQQGLDTGDLVTLSGSHTMGKARCVSFRQRIYEKSTEENFDYYKRYTTFRRILRSICPESGRDDALGALDFKTPTRFDNLYFHNIIEGKGLLQSDNVLVREDLEGEIREQVRAYASDQQLFFASYVNSIVKMGNINVLTGNEGEVRKNCRFVNP* 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6404367 6406247 - Vvi2g604 Vvi2g604 783303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g604 332 PANTHER PEROXIDASE 72-RELATED 5 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi2g604 332 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Vvi2g604 332 CDD secretory_peroxidase 28 330 IPR033905 GO:0004601|GO:0042744
Vvi2g604 332 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi2g604 332 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi2g604 332 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi2g604 332 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi2g604 332 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi2g604 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Vvi2g604 332 ProSiteProfiles Plant heme peroxidase family profile. 27 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi2g604 332 SUPERFAMILY Heme-dependent peroxidases 29 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi2g604 332 Gene3D - 32 331 - -
Vvi2g604 332 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi2g604 332 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi2g604 332 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi2g604 332 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi2g604 332 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi2g604 332 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi2g604 332 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi2g604 332 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi2g604 332 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi2g604 332 PANTHER PEROXIDASE 20 5 331 - -
Vvi2g604 332 Pfam Peroxidase 44 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi2g604 332 Gene3D Peroxidase, domain 2 165 311 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g604 K00430 - vvi:100262575 665.996